The Best Hotels Closest to San Diego Natural History Museum in San Diego for 2026

The entrance to the Natural History Museum with a grand staircase leading up to the doors.

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Our top choices for San Diego Natural History Museum hotels

A narrow, enclosed walkway with wooden railings and a metal grid barrier, leading to a building entrance.

An outdoor seating area with sofas and chairs, a wooden staircase, and potted plants.

A modern bedroom with a large bed, a nightstand, a wall-mounted lamp, and a window with curtains.

A modern interior with concrete walls, wooden beams, and a central planter with plants.

1. City24 Hotel Little Italy Mission Hills

2.3 km from San Diego Natural History Museum

Donavin

AED 422

AED 601 total

includes taxes & fees

26 Oct - 27 Oct

A hotel room with a herringbone-patterned floor, a bed, a chair, and curtains with room numbers.

A modern conference room with a wooden floor, white chairs, and a long table.

A modern lounge area with a blue sofa, yellow armchair, and a coffee table with a book and a potted plant.

A modern office space with a reception desk, seating area, and plants.

2. Stay Classy Hostel

East Village, 2.3 km from San Diego Natural History Museum

AED 228

AED 260 total

includes taxes & fees

12 Nov - 13 Nov

A rooftop pool with lounge chairs and a city skyline in the background.

A modern living room with a large sliding glass door leading to a balcony, a leather sofa, a coffee table with a board game, and a flat-screen TV.

A modern building with a sign reading "kasa little Italy" and a glass entrance.

A modern lobby with seating areas, large windows, and indoor plants.

3. Kasa Little Italy San Diego

2.3 km from San Diego Natural History Museum

Victor

AED 793

AED 1,226 total

includes taxes & fees

9 Nov - 10 Nov

A luxurious room with a grand piano, plush blue sofas, ornate chandeliers, and elegant decor.

A luxurious room with ornate chandeliers, a grand staircase, and plush seating.

A fountain with multiple water jets in a courtyard with seating and potted plants.

A luxurious lobby with a grand chandelier, plush blue sofas, and ornate decor.

4. Westgate Hotel

2.3 km from San Diego Natural History Museum

Arlet

AED 497

AED 704 total

includes taxes & fees

10 Nov - 11 Nov

A bar area with a glass ceiling, a central bar counter, and multiple stools.

A luxurious interior with a large chandelier, patterned sofas, and a view of a cityscape through a large window.

A large swimming pool with lounge chairs and umbrellas, surrounded by palm trees and a building with a striped facade.

A checkered floor with round tables and chairs, a patterned ceiling, and large windows.

5. Lafayette Hotel & Club

2.6 km from San Diego Natural History Museum

katie

AED 1,003

AED 1,153 total

includes taxes & fees

19 Oct - 20 Oct

A high-rise hotel with multiple floors, a prominent sign at the top, and a well-lit facade.

A spacious lobby with a high ceiling, leather seating, multiple tables, and a large flat-screen TV mounted on the wall.

A spacious bar/lounge area with leather seating, a bar counter, and hanging pendant lights.

A lobby with a purple-lit ceiling, a large wall mural, and seating areas.

6. Marriott Vacation Club®, San Diego

1.8 km from San Diego Natural History Museum

Veronica Dangerfield

AED 683

AED 792 total

includes taxes & fees

26 Oct - 27 Oct

A spacious dining area with high ceilings, large chandeliers, and a modern interior design.

A bar area with a high ceiling, patterned wall, and seating.

A multi-story hotel with a prominent 'PENDR' sign, large windows, and a corner entrance.

A rooftop pool area with lounge chairs and a view of the building's brick facade.

7. Pendry San Diego

Gaslamp Quarter, 2.8 km from San Diego Natural History Museum

Halil

AED 1,084

AED 1,458 total

includes taxes & fees

3 Nov - 4 Nov

A modern bar area with a curved counter, multiple bar stools, and a large window offering a view of the cityscape.

An outdoor patio area with seating arrangements, including sofas, chairs, and round tables.

A spacious lobby with large windows, curved ceiling, and comfortable seating areas.

A spacious lobby with a high ceiling, a large sectional sofa, multiple seating areas, and a modern chandelier.

8. Omni San Diego Hotel at the Ballpark

Gaslamp Quarter, 3 km from San Diego Natural History Museum

James

AED 719

AED 1,000 total

includes taxes & fees

14 Oct - 15 Oct

A modern bedroom with a brick wall, a bed, a desk, and a seating area.

A building entrance with a large arched doorway, the number 432 above it, and a brick-paved area in front.

A cafe with outdoor seating, a sign reading "INFUSED DRINKS NATURE'S KITCHEN," and a "BREAKFAST @ Cafe21" sign.

A modern living room with a brick wall, a flat-screen TV, a round red rug, and a seating area with a sofa and chairs.

9. Keating Hotel By At Mine Hospitality

East Village, 2.3 km from San Diego Natural History Museum

Jessica

AED 199

AED 514 total

includes taxes & fees

25 Oct - 26 Oct

A rooftop lounge with a view of the city and ocean, featuring a sofa, chairs, and round tables.

A harbor with boats, a large building, and a parking area.

A cruise ship docked at a port with a large shipyard and military vessel in the background.

A modern hotel with a prominent yellow and blue facade, large windows, and a well-lit entrance area with palm trees.

10. Springhill Suites San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Rolando

AED 683

AED 794 total

includes taxes & fees

8 Nov - 9 Nov

A restaurant with outdoor seating, brick walls, and decorative lighting.

A vintage car parked in front of a building with a sign that reads "Horton Grand Hotel."

A spacious lobby with a high ceiling, large windows, and a central chandelier.

A spacious lobby with high ceilings, large windows, and elegant furniture.

11. The Horton Grand, Downtown/Gaslamp Quarter

2.8 km from San Diego Natural History Museum

AED 565

AED 757 total

includes taxes & fees

8 Nov - 9 Nov

A narrow hotel room with a kitchenette, a dining area, and a bed.

A modern kitchen with white cabinets, a black refrigerator, and a microwave.

A modern living room with a dining area, a coffee machine, and a TV on the wall.

A modern kitchen with a dining area, wooden floors, and a large mirror.

12. The Artifact Inn

East Village, 2.3 km from San Diego Natural History Museum

Chris

AED 321

AED 838 total

includes taxes & fees

14 Oct - 15 Oct

A hotel room with two beds, a large mirror, a wooden headboard, and a carpeted floor.

A modern interior with a seating area, a bookshelf, and a view through large windows.

A modern living room with a wooden dining table, blue sofa, patterned chairs, and a large window with a view of the street.

A hotel with a modern design, featuring a prominent 'Hotel Z' sign, a staircase, and a large window.

13. Hotel Z

Gaslamp Quarter, 2.6 km from San Diego Natural History Museum

Sarah

AED 473

AED 676 total

includes taxes & fees

20 Oct - 21 Oct

A multi-level interior with a staircase, wooden doors, and a balcony with plants.

A kitchen area with stainless steel appliances, a coffee machine, and a variety of kitchen utensils. There is a sign above the counter that reads "gaslamp hostel SAN DIEGO".

A kitchen area with stainless steel appliances, a coffee machine, and a counter with various kitchen tools.

An outdoor dining area with tables and orange umbrellas, surrounded by buildings including the WM. PENN HOTEL.

14. Gaslamp Hostel

Gaslamp Quarter, 2.4 km from San Diego Natural History Museum

Karin

AED 338

AED 384 total

includes taxes & fees

1 Nov - 2 Nov

A modern interior with a round table, two chairs, a hanging lamp, and a view of urban buildings through large windows.

A modern interior with a long wooden table, blue bar stools, a sofa, and large windows offering a view of the street.

A modern hotel room with a bed, a sofa, a dining area, and a kitchen.

A modern kitchen with a built-in washer, a coffee maker, and a large window with a view of buildings.

15. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

East Village, 2.5 km from San Diego Natural History Museum

Nathan

AED 690

AED 927 total

includes taxes & fees

26 Oct - 27 Oct

A hotel entrance with a stone archway, multiple windows, and potted plants.

A variety of potted plants, including cacti and other greenery, arranged in front of a building with large windows.

A spacious living room with a high ceiling, multiple seating areas, and abundant indoor plants.

A modern bedroom with a large bed, a decorative headboard, a nightstand, and a view of the city through large windows.

16. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Molly

AED 731

AED 847 total

includes taxes & fees

25 Oct - 26 Oct

An aerial view of a resort with multiple swimming pools, lounge areas, and palm trees.

An outdoor patio area with tables and chairs, a fire pit, and string lights.

A modern hotel with a prominent circular tower and a glass facade.

A bar area with a long counter, multiple stools, and hanging wicker lamps.

17. Marriott Marquis San Diego Marina

3.1 km from San Diego Natural History Museum

Thomas Roy

AED 1,047

AED 1,387 total

includes taxes & fees

14 Oct - 15 Oct

A rooftop terrace with outdoor seating, a view of the city, and a large window overlooking the harbor.

A hotel room with a large window offering a city view, a beige sofa with a red pillow, a floor lamp, and a small white table.

A hotel room with a large window offering a view of a marina with boats and a cityscape.

18. Residence Inn by Marriott San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Chen

AED 869

AED 1,007 total

includes taxes & fees

9 Nov - 10 Nov

A grand lobby with marble floors, a chandelier, and ornate doors.

A rooftop terrace with outdoor seating, umbrellas, and a view of the city skyline.

A hotel room with a large bed, a window with blinds, a bedside table with a lamp, and a framed picture on the wall.

A grand lobby with marble floors, ornate chandeliers, and a seating area with patterned upholstery.

19. Gaslamp Plaza Suites

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Matthew

AED 496

AED 564 total

includes taxes & fees

25 Oct - 26 Oct

A swimming pool with a tiled edge, a blue lounge chair, and decorative wooden panels.

A hotel room with a large bed, a sofa, two chairs, a small table, and a framed picture on the wall.

A modern interior with a sectional sofa, a glass coffee table, and large windows offering a view of the cityscape.

A hotel with multiple floors, a prominent sign, and a modern building in the background.

20. Best Western Plus Bayside Inn

2.3 km from San Diego Natural History Museum

Mariusz

AED 557

AED 645 total

includes taxes & fees

25 Oct - 26 Oct

View all properties

Compare popular hotels close to San Diego Natural History Museum

Property	Property class	Guest rating
City24 Hotel Little Italy Mission Hills	9.6 Exceptional 223 reviews	View
Stay Classy Hostel	9.6 Exceptional 971 reviews	View
Kasa Little Italy San Diego	9.6 Exceptional 545 reviews	View
Westgate Hotel	9.4 Exceptional 1,052 reviews	View
Lafayette Hotel & Club	9.4 Exceptional 2,080 reviews	View

Top San Diego Natural History Museum Hotel Reviews

The Westin San Diego Gaslamp Quarter

10/10 Excellent

"Excellent hotel! I stayed recently with my husband and 2 children. The staff were great with the children and just lovely. The room was large and clean. Location was also great. Would stay there again."

The Sofia Hotel

8/10 Good

"Réellement bien situé. Par ailleurs, le bâtiment est un peu désuet et entretenu de manière minimale. Le lit est confortable et la literie également. Le personnel est sympathique."

Courtyard by Marriott San Diego Downtown Little Italy

10/10 Excellent

"Clean"

Wyndham San Diego Bayside

8/10 Good

"Not enough parking, yet they charge $50 Per day. Also allow 2 free cups Of coffee but no tea. Staff not overly friendly."

Ash&9th

8/10 Good

"Definitely needs new tv’s because I feel like I was in 2013 with the cable . Otherwise a clean hotel"

Little Italy Inn - Limited Service Apart Hotel

10/10 Excellent

"The room was clean and quiet. The AC worked great! It is located in a great area to walk to restaurants, bars, shopping and the harbor."

Marriott Marquis San Diego Marina

8/10 Good

"The hotel is clean and the staff were friendly. The self parking becomes a challenge when there’s a convention going on."

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

8/10 Good

"It’s not clear where to pull over if arriving by car and right in front of hotel is a no stopping zone. You need to pull into unmarked driveway just before hotel with a no unauthorized vehicle sign and then park temporarily while checking in"

Other attractions near San Diego Natural History Museum

Fleet Science Center

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A blue sign with yellow text reading "SPANISH ART CENTER" above a tiled wall.

Spanish Village Art Center

Enjoy an outing to Spanish Village Art Center during your stay in San Diego. Discover the area's top-notch restaurants and its acclaimed theater scene.

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A detailed model of a town with a church, train tracks, and a bridge.

San Diego Model Railroad Museum

You can spend time studying the exhibits at San Diego Model Railroad Museum in San Diego. Stroll along the area's seaside or experience its fascinating museums.

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A symmetrical garden with a central reflecting pool, palm trees, and classical architecture.

Casa de Balboa

You can learn about the history of San Diego when you stop by Casa de Balboa. Stroll along the area's beautiful beaches or experience its fascinating museums.

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A gallery with classical paintings on display.

Museum of Photographic Arts

You can spend an afternoon exploring the galleries in Museum of Photographic Arts during your trip to San Diego. Stroll along the area's beautiful beaches, or simply savor its top-notch restaurants.

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A desert landscape with large cacti and sparse trees.

Desert Garden

Explore the great outdoors at Desert Garden, a lovely green space in San Diego. Wander the seaside and beautiful beaches in the area.

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A garden with a pond, colorful flowers, palm trees, and a large building with a dome.

Botanical Building

Explore the great outdoors at Botanical Building, a lovely green space in San Diego. Stroll along the area's beautiful beaches or experience its fascinating museums.

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A museum interior with classical paintings, a central bench, and a pink wall.

Timken Museum of Art

You can spend an afternoon exploring the galleries in Timken Museum of Art in San Diego. Stroll along the area's beautiful beaches or experience its acclaimed theater scene.

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Frequently asked questions

What's the area like around San Diego Natural History Museum?

San Diego Natural History Museum is located in an area of San Diego known for its beautiful ocean views, array of dining options, and popular zoo. If you're looking for a convenient place to stay, check out the 102 hotels and other accommodations you'll find within a mile.

What's the best place to stay close to San Diego Natural History Museum?

The Neon Elm Hotel is one of the top choices for your stay based on our traveler data, and this hotel offers free WiFi and in-room refrigerators. It's located just a short 1 mi (1.5 km) from San Diego Natural History Museum. Other good choices within a few miles include Wyndham San Diego Bayside and Best Western Seven Seas.

How many hotels can I expect to find near San Diego Natural History Museum?

Expedia has 102 hotels and other accommodations within a mile from San Diego Natural History Museum.

If I need to cancel the hotel reservation for my stay near San Diego Natural History Museum, will I receive a refund?

Yes! The majority of room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before the scheduled arrival. If you have a reservation that's non-refundable, you might still have the option to cancel and be given a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then use the "fully refundable" filter to review the best deals near San Diego Natural History Museum.

Where can I learn more about changing or cancelling my trip in the area near San Diego Natural History Museum?

To find more details about picking new dates or cancelling your stay near San Diego Natural History Museum, go to https://www.expedia.com/service/.

What can I see and do near San Diego Natural History Museum?

San Diego Air and Space Museum, Maritime Museum of San Diego, and USS Midway Museum feature a variety of fascinating exhibits to see while you're in town. Explore landmarks like Hotel del Coronado, Mission Basilica San Diego de Alcala, and Casa de Balboa. You can check out the local talent at Old Globe Theater, San Diego Civic Theatre, and The Rady Shell at Jacobs Park.

Find hotels near San Diego Natural History Museum, San Diego from AED 260

Change your mind

Treat yourself

Be picky

Check prices for these dates

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Our top choices for San Diego Natural History Museum hotels

1. City24 Hotel Little Italy Mission Hills

2. Stay Classy Hostel

3. Kasa Little Italy San Diego

4. Westgate Hotel

5. Lafayette Hotel & Club

6. Marriott Vacation Club®, San Diego

7. Pendry San Diego

8. Omni San Diego Hotel at the Ballpark

9. Keating Hotel By At Mine Hospitality

10. Springhill Suites San Diego Downtown/Bayfront

11. The Horton Grand, Downtown/Gaslamp Quarter

12. The Artifact Inn

13. Hotel Z

14. Gaslamp Hostel

15. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

16. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

17. Marriott Marquis San Diego Marina

18. Residence Inn by Marriott San Diego Downtown/Bayfront

19. Gaslamp Plaza Suites

20. Best Western Plus Bayside Inn

Compare popular hotels close to San Diego Natural History Museum

Top San Diego Natural History Museum Hotel Reviews

The Westin San Diego Gaslamp Quarter

The Sofia Hotel

Courtyard by Marriott San Diego Downtown Little Italy

Wyndham San Diego Bayside

Ash&9th

Little Italy Inn - Limited Service Apart Hotel

Marriott Marquis San Diego Marina

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

Other attractions near San Diego Natural History Museum

Fleet Science Center

Spanish Village Art Center

San Diego Model Railroad Museum

Casa de Balboa

Museum of Photographic Arts

Desert Garden

Botanical Building

Timken Museum of Art

Frequently asked questions