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Compare 48 Apartments in Winona with updated reviews, rates, and availability.

Big River Inn - 3 bedroom apartment in Alma

9.0 out of 10, Wonderful, (8)
"Great weekend! Accommodations were perfect for the weekend. Noise machines in each room were a great surprise and much appreciated. We would love to come back."
The price is AED 479
AED 1,041 total
includes taxes & fees
8 Jun - 9 Jun
Big River Inn - 3 bedroom apartment in Alma

Entire cozy Rollingstone apt in Mississippi Valley, just 10 min from Winona!

10.0 out of 10, Exceptional, (17)
"This place is a perfect gem. Cozy and comfortable. It was perfect for the 6 of us ladies. A little get a way that was highly needed."
Entire cozy Rollingstone apt in Mississippi Valley, just 10 min from Winona!

Marina getaway located on the back sloughs of the mighty Mississippi.

10.0 out of 10, Exceptional, (62)
"We had a great stay! Perfect quiet place near everything!"
Marina getaway located on the back sloughs of the mighty Mississippi.

Downtown La Crosse Modern Flat

9.4 out of 10, Exceptional, (56)
"The place was great and the location was very convenient, especially if you wanted to stay up partying into the night (as advertised). "
The price is AED 312
AED 1,183 total
includes taxes & fees
9 Jun - 10 Jun
Downtown La Crosse Modern Flat

Downtown La Crosse 3-Bedroom Retreat

9.4 out of 10, Exceptional, (6)
Downtown La Crosse 3-Bedroom Retreat

Studio apartment overlooking the beautiful Mississippi River

10.0 out of 10, Exceptional, (111)
"Great place to stay, room to park with your boat, friendly host, beautifull views of the mississippi river"
Studio apartment overlooking the beautiful Mississippi River

Historic Withee Home / 3rd Level / Sleeps 2

9.0 out of 10, Wonderful, (7)
"Everything about this stay was wonderful. The neighborhood is great for walking and sightseeing."
The price is AED 312
AED 561 total
includes taxes & fees
6 Jul - 7 Jul
Historic Withee Home / 3rd Level / Sleeps 2

Three-Bedroom Apartment with River View

9.2 out of 10, Wonderful, (50)
"Nice location and perfect size for the 5 of us women. We enjoyed our stay!"
Three-Bedroom Apartment with River View

Spacious 2-bedroom loft above the International Owl Center in Houston, MN

2.0 star property
10.0 out of 10, Exceptional, (3)
"Phenomenal place. Rick’s place is beautiful, very open and luxurious. There is so much care in the craftsmanship, decor and arrangement. We would love to stay again!"
The price is AED 823
AED 1,005 total
includes taxes & fees
9 Jun - 10 Jun
Spacious 2-bedroom loft above the International Owl Center in Houston, MN

Charming 2-bedroom upper apartment in fabulous downtown Saint Charles, MN.

Charming 2-bedroom upper apartment in fabulous downtown Saint Charles, MN.

This AMAZING river getaway is PERFECT for YOU! Private deck, grill & fire pit!

9.6 out of 10, Exceptional, (4)
"Unique location close to downtown Winona-perfect for our family gathering!"
This AMAZING river getaway is PERFECT for YOU! Private deck, grill & fire pit!

Hokah Ohana House: Historic charm, Modern updates

10.0 out of 10, Exceptional, (25)
"It was cozy and bright!"
Hokah Ohana House: Historic charm, Modern updates

Spacious Loft in Downtown La Crosse

9.8 out of 10, Exceptional, (79)
"Great location for family to gather for the holidays. Plenty of room for everyone. Right in the heart of downtown La Crosse. Easy walks to shops and restaurants."
Spacious Loft in Downtown La Crosse

Warm and Cozy Upstairs Apartment

9.4 out of 10, Exceptional, (11)
"Clean and cozy! Loved our stay!"
The price is AED 413
AED 599 total
includes taxes & fees
9 Jun - 10 Jun
Warm and Cozy Upstairs Apartment

Downtown La Crosse Modern Flat

9.8 out of 10, Exceptional, (43)
"Loved the place, Beds were Awesome...will return "
Downtown La Crosse Modern Flat

Water Access Studio with Full Kitchen

9.0 out of 10, Wonderful, (10)
"Perfect for my husband and I for a little weekend getaway! Renee was kind and responsive, gave a great little tour of the property. Beautiful part of town, short distance from many activities and great restaurants!"
Water Access Studio with Full Kitchen

Historic Downtown Top Floor 2BR Apartment

9.6 out of 10, Exceptional, (17)
"We really liked being within walking distance from everything we wanted to do!"
Historic Downtown Top Floor 2BR Apartment

Spacious 4 Bedroom Downtown La Crosse

9.8 out of 10, Exceptional, (37)
"Was there on a work trip "
Spacious 4 Bedroom Downtown La Crosse

NEW Beautiful Downtown Historic 3 bedroom apartment on iconic Pearl Street

2.0 star property
10.0 out of 10, Exceptional, (3)
"We loved this place. Very clean. Charming. Walking distance from everything. We will stay here again!"
NEW Beautiful Downtown Historic 3 bedroom apartment on iconic Pearl Street

Small Town Vibe

10.0 out of 10, Exceptional, (2)
"We enjoyed our stay and loved being able to walk to several businesses from the apartment! We had a lovely time!"
Small Town Vibe
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Frequently asked questions

What's it like to stay at an apartment in Winona?
You can choose from 10 apartments in Winona for your trip. Why not check out the area’s museums and take time to enjoy its riverfront?
Are you thinking about apartments over traditional hotel rooms?
Often offering more space than a traditional hotel room, an apartment comes with a kitchen, so you can cook some of your meals. Apartments are ideal for families who want the conveniences of home but also for solo travelers who want to stay in at night and plan out their next day.
What's the top apartment for a stay in Winona?
Listed below are some of the more popular apartments in the area: This AMAZING river getaway is PERFECT for YOU! Private deck, grill & fire pit!: Includes free WiFi and separate dining areas. Access to onsite laundry facilities is available on site. Marina getaway located on the back sloughs of the mighty Mississippi.: Located 28.5 mi/45.9 km away in La Crosse. Free WiFi, private patios, and sofa beds are included. Access to onsite laundry facilities is available on site. Big River Inn - 3 bedroom apartment in Alma: Located in Alma, 22.2 mi/35.7 km away. Includes free WiFi, private patios, and Smart TVs. Access to onsite laundry facilities is available on site. Downtown La Crosse Industrial Flat: Located 26.6 mi/42.7 km away in La Crosse. Amenities include sofa beds. Access to onsite laundry facilities is available on site.
How many apartments will I find in Winona?
Expedia has 10 apartments to book in Winona.
What will the weather be like in Winona?
Though weather is just one factor, it can really affect your travel plans, especially if you’re planning an extended stay in Winona. The hottest months are usually July and August with an average temp of 68°F, while the coldest months are January and February with an average of 23°F. The snowiest months in Winona are January, April, March, and December, with each month seeing an average of 5 inches of snowfall.
What should I see and do in Winona?
Winona is known for its riverfront and museums. Enjoy the outdoors at Lake Lodge Recreation Center and Lake Park, or simply take in cultural attractions like Minnesota Marine Art Museum and Pickwick Mill. Great River Bluffs State Park and Mississippi River are other places to visit while you’re in town.
What's the best way to get to and around Winona?
Knowing a bit about the transportation options can make your trip smoother when you get to your destination. Fly into La Crosse, WI (LSE-La Crosse Municipal), which is located 23.6 mi (37.9 km) from the heart of the city. You can also search for flights into Rochester, MN (RST-Rochester Intl.), which is 42.2 mi (67.8 km) away. To venture out into the surrounding area, hop aboard a train at Winona Station.