An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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This weekend
9 Oct - 11 Oct
Next weekend
16 Oct - 18 Oct

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Our top choices for Mission Bay hotels

A pool area with a hot tub, lounge chairs, and umbrellas.

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,457 reviews)
"Awesome location by the Bay Firefly restaurant was excellent staff and food"
Canada
Satish
The price is AED 621
AED 820 total
includes taxes & fees
1 Nov - 2 Nov
The Dana on Mission Bay
A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.

2. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,646 reviews)
"Beautiful resort! Would definitely stay there again!!"
United States
brittany
The price is AED 804
AED 1,119 total
includes taxes & fees
31 Oct - 1 Nov
San Diego Mission Bay Resort
An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.

3. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,923 reviews)
"Great property and staff was wonderful"
Canada
Jesse
The price is AED 764
AED 1,072 total
includes taxes & fees
1 Nov - 2 Nov
Paradise Point Resort & Spa
A resort pool with a lazy river, palm trees, and a view of the ocean.

4. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,642 reviews)
"With our stay we received a free 1 hour paddle board rental which was nice."
United States
Dain Mitsu
The price is AED 775
AED 1,085 total
includes taxes & fees
28 Oct - 29 Oct
Hyatt Regency Mission Bay Spa and Marina
A modern building with multiple windows, outdoor seating, and a chessboard.

5. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,391 reviews)
"Very nice & very clean place to stay"
United States
Xuan
The price is AED 599
AED 689 total
includes taxes & fees
13 Oct - 14 Oct
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
A hotel breakfast area with a long counter displaying various food items, including fruits, pastries, and a coffee station.

6. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very good, (3,063 reviews)
"Good hotel"
United States
Steve
The price is AED 503
AED 578 total
includes taxes & fees
20 Oct - 21 Oct
Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
A modern dining area with wooden tables and chairs, a central bar area, and a view of the city through large windows.

7. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

La Quinta Inn & Suites by Wyndham San Diego Mission Bay
3.0 star property
North Pacific Beach, 3.5 km from Mission Bay
8.0 out of 10, Very good, (1,620 reviews)
"We only stayed one night but it was nice and easy"
United States
Lauren
The price is AED 398
AED 458 total
includes taxes & fees
1 Nov - 2 Nov
La Quinta Inn & Suites by Wyndham San Diego Mission Bay
A spacious kitchen with a central island, wooden ceiling, and modern lighting fixtures.

8. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,012 reviews)
"The room was clean and the staff was very nice."
United States
Patricia
The price is AED 529
AED 608 total
includes taxes & fees
12 Oct - 13 Oct
Holiday Inn Express San Diego - SeaWorld Area by IHG
A hotel with a central courtyard, palm trees, and a fountain.

9. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,523 reviews)
"Overall amazing and would stay again"
United States
Nayibe
The price is AED 482
AED 554 total
includes taxes & fees
26 Oct - 27 Oct
Hilton Garden Inn San Diego Old Town/SeaWorld Area
A living room with a large window, a flat-screen TV, and a patterned rug.

10. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,403 reviews)
"Great stay"
United States
Denise
The price is AED 414
AED 475 total
includes taxes & fees
11 Oct - 12 Oct
GreenTree Inn San Diego Mission Bay
An outdoor seating area with a fire feature, surrounded by palm trees and modern buildings.

11. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
4.2 km from Mission Bay
8.8 out of 10, Excellent, (1,734 reviews)
"Clean room, very friendly staff, great breakfast."
United States
Edith
The price is AED 599
AED 689 total
includes taxes & fees
1 Nov - 2 Nov
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
A reception desk with a wooden panel wall, a crescent-shaped logo, and a digital payment terminal.

12. Comfort Inn San Diego - SeaWorld Area

Comfort Inn San Diego - SeaWorld Area
3.5 star property
2.8 km from Mission Bay
8.6 out of 10, Excellent, (4,187 reviews)
"Close to Seaworld, good breakfast."
United States
Yesenia
The price is AED 400
AED 459 total
includes taxes & fees
26 Oct - 27 Oct
Comfort Inn San Diego - SeaWorld Area
A pool area with lounge chairs and palm trees.

13. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,178 reviews)
"Great place, will stay here again if we have the opportunity."
Canada
Glenna
The price is AED 526
AED 604 total
includes taxes & fees
25 Oct - 26 Oct
Best Western Plus Hacienda Hotel Old Town
A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

14. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,201 reviews)
"Great place to stay!"
United States
Nayla
The price is AED 385
AED 442 total
includes taxes & fees
12 Oct - 13 Oct
Wyndham Garden San Diego Near SeaWorld
An outdoor patio area with tables and chairs, string lights, and a building with balconies.

15. Fairfield Inn & Suites San Diego Old Town

Fairfield Inn & Suites San Diego Old Town
3.0 star property
Old Town San Diego, 4.1 km from Mission Bay
8.8 out of 10, Excellent, (1,208 reviews)
"Good breakfast, nice public areas."
United States
Timothy
The price is AED 509
AED 585 total
includes taxes & fees
25 Oct - 26 Oct
Fairfield Inn & Suites San Diego Old Town
A building with a "Bienvenidos" sign, palm trees, and a well-maintained garden.

16. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (2,026 reviews)
"Have stayed here before and property is always clean and has good breakfast."
United States
Cindy
The price is AED 534
AED 613 total
includes taxes & fees
6 Nov - 7 Nov
Old Town Inn
A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.

17. Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
5.3 km from Mission Bay
9.4 out of 10, Exceptional, (1,699 reviews)
"Amazing place location and hotel staff were amazing."
United States
Orlyn
The price is AED 672
AED 772 total
includes taxes & fees
25 Oct - 26 Oct
Homewood Suites by Hilton San Diego Airport/Liberty Station
A modern hotel room with a large bed, bedside tables, a desk, and a wardrobe.

18. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,083 reviews)
"Love the hotel, the breakfast was good and the staff was exceptional."
United States
Patricia
The price is AED 595
AED 684 total
includes taxes & fees
25 Oct - 26 Oct
Holiday Inn Express San Diego Airport - Old Town by IHG
A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

19. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,717 reviews)
"Clean rooms and friendly staff!"
United States
Ana Lopez
The price is AED 629
AED 724 total
includes taxes & fees
26 Oct - 27 Oct
Hampton Inn & Suites San Diego Airport Liberty Station
A hotel room with two beds, a desk, a chair, and a large window with a view of the outdoors.

20. Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
5.6 km from Mission Bay
8.4 out of 10, Very good, (2,075 reviews)
"Nice room, convenient to the airport without the noise, extremely helpful staff."
United States
James
The price is AED 554
AED 636 total
includes taxes & fees
20 Oct - 21 Oct
Best Western Yacht Harbor Hotel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.
A large stadium with the sign "Cobo Park" and palm trees around it.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

A pier extending into the ocean with buildings at the end, under a partly cloudy sky.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

A coastal cityscape with a long sandy beach, a pier, and dense urban buildings.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

A theater marquee with ornate designs and the name "Gaslamp Quarter".

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

A beach with palm trees, a hotel, and people enjoying the sand and water.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

Top Mission Bay Hotel Reviews

Sheraton San Diego Resort

Sheraton San Diego Resort

10/10 Excellent
"Good service nice .crean rooms"
Bernardo 2-night trip
Posted 2 hours ago
Sheraton San Diego Resort

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.