What is Mission Bay like?

You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.

What's a favorite hotel to stay in Mission Bay?

Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort .

How many hotels should I expect to find in Mission Bay?

If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.

Where can I learn more about changing or cancelling my trip to Mission Bay?

To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page .

What is there to do around this San Diego neighborhood?

Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.

Top Mission Bay Hotels

An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

Change your mind
Book hotels with free cancellation
Treat yourself
Sign in to save 10% or more on thousands of hotels
Sign in
Be picky
Search almost a million properties worldwide

Check prices for these dates

Tonight

Tomorrow

Next weekend

In two weeks

Our top choices for Mission Bay hotels

A pool area with a hot tub, lounge chairs, and umbrellas.

1. The Dana on Mission Bay

Mission Bay

Zachary

AED 861 total

includes taxes & fees

3 Nov - 4 Nov

A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.

2. San Diego Mission Bay Resort

Mission Bay

Ronald

AED 1,119 total

includes taxes & fees

28 Oct - 29 Oct

A resort pool with a lazy river, palm trees, and a view of the ocean.

3. Hyatt Regency Mission Bay Spa and Marina

Mission Bay

Dain Mitsu

AED 1,102 total

includes taxes & fees

28 Oct - 29 Oct

An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.

4. Paradise Point Resort & Spa

Mission Bay

Jesse

AED 1,064 total

includes taxes & fees

8 Nov - 9 Nov

A modern building with multiple windows, outdoor seating, and a chessboard.

5. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

2.8 km from Mission Bay

Ana Livia

AED 714 total

includes taxes & fees

19 Oct - 20 Oct

A hotel breakfast area with a long counter displaying various food items, including fruits, pastries, and a coffee station.

6. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

3.6 km from Mission Bay

LaTrisha

AED 579 total

includes taxes & fees

12 Oct - 13 Oct

A modern dining area with wooden tables and chairs, a central bar area, and a view of the city through large windows.

7. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

North Pacific Beach, 3.5 km from Mission Bay

Amber

AED 458 total

includes taxes & fees

1 Nov - 2 Nov

A hotel with a central courtyard, palm trees, and a fountain.

8. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Old Town San Diego, 3.1 km from Mission Bay

Kristen

AED 553 total

includes taxes & fees

9 Nov - 10 Nov

A spacious kitchen with a central island, wooden ceiling, and modern lighting fixtures.

9. Holiday Inn Express San Diego - SeaWorld Area by IHG

2.3 km from Mission Bay

Regina

AED 570 total

includes taxes & fees

8 Nov - 9 Nov

10. Comfort Inn San Diego - SeaWorld Area

2.8 km from Mission Bay

Anthony

AED 467 total

includes taxes & fees

8 Nov - 9 Nov

An outdoor seating area with a fire feature, surrounded by palm trees and modern buildings.

11. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

4.2 km from Mission Bay

Edith

AED 714 total

includes taxes & fees

1 Nov - 2 Nov

A living room with a large window, a flat-screen TV, and a patterned rug.

12. GreenTree Inn San Diego Mission Bay

Pacific Beach, 3 km from Mission Bay

Denise

AED 414 total

includes taxes & fees

19 Oct - 20 Oct

A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

13. Wyndham Garden San Diego Near SeaWorld

2.6 km from Mission Bay

Nayla

AED 442 total

includes taxes & fees

18 Oct - 19 Oct

A pool area with lounge chairs and palm trees.

14. Best Western Plus Hacienda Hotel Old Town

Old Town San Diego, 3.7 km from Mission Bay

shon

AED 604 total

includes taxes & fees

25 Oct - 26 Oct

A building with a "Bienvenidos" sign, palm trees, and a well-maintained garden.

15. Old Town Inn

3.5 km from Mission Bay

Cindy

AED 580 total

includes taxes & fees

9 Nov - 10 Nov

An outdoor patio area with tables and chairs, string lights, and a building with balconies.

16. Fairfield Inn & Suites San Diego Old Town

Old Town San Diego, 4.1 km from Mission Bay

Marjorie

AED 585 total

includes taxes & fees

25 Oct - 26 Oct

A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

17. Hampton Inn & Suites San Diego Airport Liberty Station

5.3 km from Mission Bay

Jason

AED 678 total

includes taxes & fees

8 Nov - 9 Nov

A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.

18. Homewood Suites by Hilton San Diego Airport/Liberty Station

5.3 km from Mission Bay

Orlyn

AED 772 total

includes taxes & fees

25 Oct - 26 Oct

A modern hotel room with a large bed, bedside tables, a desk, and a wardrobe.

19. Holiday Inn Express San Diego Airport - Old Town by IHG

4.8 km from Mission Bay

Patricia

AED 608 total

includes taxes & fees

9 Nov - 10 Nov

A modern dining area with multiple tables and chairs, large windows, and artwork on the walls.

20. Comfort Inn San Diego Old Town

Old Town San Diego, 4 km from Mission Bay

James

AED 464 total

includes taxes & fees

26 Oct - 27 Oct

View all properties

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.

A large stadium with the sign "Cobo Park" and palm trees around it.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

See properties

A pier extending into the ocean with buildings at the end, under a partly cloudy sky.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

See properties

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

See properties

A coastal cityscape with a long sandy beach, a pier, and dense urban buildings.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

See properties

A beach with palm trees, a hotel, and people enjoying the sand and water.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

See properties

Top Mission Bay Hotel Reviews

Paradise Point Resort & Spa

10/10 Excellent

"We paid a pretty penny for this place because of all the amenities, however, you have to pay another pretty penny just to use them."

California Suites Hotel

8/10 Good

"At first look I was not overly thrilled but once we settled in our stay for the price was very nice. If you’re looking for an affordable hotel that’s clean this is your place. The hotel is a little on the older side but it’s clean and they take care of the property. My kids enjoyed swimming everyday in the pool, which was also clean. There are restaurants and shopping close by. A great brewery/restaurant a few feet from the property that you can walk to. They offered free ice cream, coffee and tea in the lobby."

The Dana on Mission Bay

10/10 Excellent

"Our 5 day stay at the Dana was awesome. The grounds are well kept and beautiful. The staff were all so friendly. The Firefly restaurant was delicious and so convenient. Being on a marina the views are amazing especially the stunning sunsets. You can rent bikes , kayaks and jet skis for a fee. The pools were refreshing. The rooms were very clean and they replenished the towels each day. Some say the rooms are outdated a bit but didn’t bother us. You’re on vacation, in the rooms to sleep. Our king size bed and the pillows were comfy . They have a free shuttle that took us to SeaWorld and back….that was cool. We loved our stay and had no complaints. We will be back again."

Find hotels in Mission Bay, San Diego

Change your mind

Treat yourself

Be picky

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

2. San Diego Mission Bay Resort

3. Hyatt Regency Mission Bay Spa and Marina

4. Paradise Point Resort & Spa

5. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

6. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

7. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

8. Hilton Garden Inn San Diego Old Town/SeaWorld Area

9. Holiday Inn Express San Diego - SeaWorld Area by IHG

10. Comfort Inn San Diego - SeaWorld Area

11. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

12. GreenTree Inn San Diego Mission Bay

13. Wyndham Garden San Diego Near SeaWorld

14. Best Western Plus Hacienda Hotel Old Town

15. Old Town Inn

16. Fairfield Inn & Suites San Diego Old Town

17. Hampton Inn & Suites San Diego Airport Liberty Station

18. Homewood Suites by Hilton San Diego Airport/Liberty Station

19. Holiday Inn Express San Diego Airport - Old Town by IHG

20. Comfort Inn San Diego Old Town

Where to stay in Mission Bay

Downtown San Diego

Pacific Beach

Gaslamp Quarter

Mission Beach

Ocean Beach

Top Mission Bay Hotel Reviews

Paradise Point Resort & Spa

Frequently asked questions