An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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Next weekend
23 Oct - 25 Oct
In two weeks
30 Oct - 1 Nov

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Our top choices for Mission Bay hotels

A pool area with a hot tub, lounge chairs, and umbrellas.

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,470 reviews)
"Great place, super convenient for going to sea world"
United States
andrea
The price is AED 641
AED 843 total
includes taxes & fees
5 Nov - 6 Nov
The Dana on Mission Bay
A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.

2. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,647 reviews)
"Beautiful property, great staff."
United States
Mary
The price is AED 841
AED 1,161 total
includes taxes & fees
28 Oct - 29 Oct
San Diego Mission Bay Resort
A resort pool with a lazy river, palm trees, and a view of the ocean.

3. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,638 reviews)
"Beautiful and the breakfast was delicious!"
United States
Megan
The price is AED 801
AED 1,115 total
includes taxes & fees
5 Nov - 6 Nov
Hyatt Regency Mission Bay Spa and Marina
An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.

4. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,936 reviews)
"Great property and staff was wonderful"
Canada
Jesse
The price is AED 764
AED 1,072 total
includes taxes & fees
1 Nov - 2 Nov
Paradise Point Resort & Spa
A modern building with multiple windows, outdoor seating, and a chessboard.

5. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,426 reviews)
"Clean, convenient and the beds were super comfy!"
United States
Tammy
The price is AED 590
AED 678 total
includes taxes & fees
1 Nov - 2 Nov
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
A hotel breakfast area with a long counter displaying various food items, including fruits, pastries, and a coffee station.

6. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very good, (3,070 reviews)
"Clean and spacious room, good breakfast, nice staff."
United States
Antonia
The price is AED 470
AED 540 total
includes taxes & fees
15 Nov - 16 Nov
Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
A modern dining area with wooden tables and chairs, a central bar area, and a view of the city through large windows.

7. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

La Quinta Inn & Suites by Wyndham San Diego Mission Bay
3.0 star property
North Pacific Beach, 3.5 km from Mission Bay
8.0 out of 10, Very good, (1,634 reviews)
"This place is great if you are looking for something that is not too expensive, is clean, and has a really comfy bed."
United States
Amber
The price is AED 336
AED 387 total
includes taxes & fees
20 Oct - 21 Oct
La Quinta Inn & Suites by Wyndham San Diego Mission Bay
A spacious kitchen with a central island, wooden ceiling, and modern lighting fixtures.

8. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,006 reviews)
"Very nice cloae to everything stores, restaurants airport."
United States
Regina
The price is AED 466
AED 536 total
includes taxes & fees
26 Oct - 27 Oct
Holiday Inn Express San Diego - SeaWorld Area by IHG
A hotel with a central courtyard, palm trees, and a fountain.

9. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,527 reviews)
"Nice, clean hotel for a quick stay."
United States
Kristen
The price is AED 412
AED 474 total
includes taxes & fees
15 Nov - 16 Nov
Hilton Garden Inn San Diego Old Town/SeaWorld Area
A reception desk with a wooden panel wall, a crescent-shaped logo, and a digital payment terminal.

10. Comfort Inn San Diego - SeaWorld Area

Comfort Inn San Diego - SeaWorld Area
3.5 star property
2.8 km from Mission Bay
8.6 out of 10, Excellent, (4,227 reviews)
"Staff was great and welcoming, the rooms were clean and cozy!"
United States
Anthony
The price is AED 390
AED 449 total
includes taxes & fees
9 Nov - 10 Nov
Comfort Inn San Diego - SeaWorld Area
An outdoor lounge area with seating, a fire feature, and a view of the building's interior.

11. Hampton Inn San Diego/Mission Valley

Hampton Inn San Diego/Mission Valley
2.5 star property
4.3 km from Mission Bay
8.6 out of 10, Excellent, (1,797 reviews)
"Great stay good breakfast, good location"
United States
Slawomir
The price is AED 496
AED 571 total
includes taxes & fees
25 Oct - 26 Oct
Hampton Inn San Diego/Mission Valley
A living room with a large window, a flat-screen TV, and a patterned rug.

12. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,419 reviews)
"Great stay!"
United States
Arman
The price is AED 380
AED 437 total
includes taxes & fees
21 Oct - 22 Oct
GreenTree Inn San Diego Mission Bay
A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

13. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,180 reviews)
"Great place to stay!"
United States
Nayla
The price is AED 352
AED 405 total
includes taxes & fees
25 Oct - 26 Oct
Wyndham Garden San Diego Near SeaWorld
A modern breakfast bar with a variety of food items, a coffee station, and neatly arranged plates and bowls.

14. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
4.2 km from Mission Bay
8.8 out of 10, Excellent, (1,735 reviews)
"Clean room, very friendly staff, great breakfast."
United States
Edith
The price is AED 534
AED 614 total
includes taxes & fees
8 Nov - 9 Nov
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
A building with a "Bienvenidos" sign, palm trees, and a well-maintained garden.

15. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (2,032 reviews)
"Very nice well kept hotel."
United States
JOHN
The price is AED 420
AED 482 total
includes taxes & fees
17 Nov - 18 Nov
Old Town Inn
An outdoor patio area with tables and chairs, string lights, and a building with balconies.

16. Fairfield Inn & Suites San Diego Old Town

Fairfield Inn & Suites San Diego Old Town
3.0 star property
Old Town San Diego, 4.1 km from Mission Bay
8.8 out of 10, Excellent, (1,210 reviews)
"Great stay near all the attractions, restaurants."
United States
Marjorie
The price is AED 449
AED 516 total
includes taxes & fees
15 Nov - 16 Nov
Fairfield Inn & Suites San Diego Old Town
A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

17. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,727 reviews)
"Love to stay here, very nice accommodations, quiet, great service, the airport shuttle very convenient."
United States
MANUEL
The price is AED 599
AED 689 total
includes taxes & fees
9 Nov - 10 Nov
Hampton Inn & Suites San Diego Airport Liberty Station
A modern hotel room with a large bed, bedside tables, a desk, and a wardrobe.

18. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,089 reviews)
"Love the hotel, the breakfast was good and the staff was exceptional."
United States
Patricia
The price is AED 529
AED 608 total
includes taxes & fees
15 Nov - 16 Nov
Holiday Inn Express San Diego Airport - Old Town by IHG
A pool area with lounge chairs and palm trees.

19. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,182 reviews)
"Wonderful place to stay"
United States
shon
The price is AED 526
AED 604 total
includes taxes & fees
26 Oct - 27 Oct
Best Western Plus Hacienda Hotel Old Town
A modern dining area with multiple tables and chairs, large windows, and artwork on the walls.

20. Comfort Inn San Diego Old Town

Comfort Inn San Diego Old Town
2.5 star property
Old Town San Diego, 4 km from Mission Bay
8.2 out of 10, Very good, (2,078 reviews)
"Location was good since we were going to the marines base restaurants we’re walking distance and the breakfast fast good."
United States
Paula
The price is AED 404
AED 464 total
includes taxes & fees
26 Oct - 27 Oct
Comfort Inn San Diego Old Town
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.
A large stadium with the sign "Cobo Park" and palm trees around it.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

A pier extending into the ocean with buildings at the end, under a partly cloudy sky.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

A theater marquee with ornate designs and the name "Gaslamp Quarter".

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

A coastal cityscape with a long sandy beach, a pier, and dense urban buildings.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

A coastal walkway with a statue, benches, and people.

Point Loma

This seaside hilly peninsula offers marine recreation, yachting, and whale watching. Explore Cabrillo National Monument, Old Point Loma Lighthouse, and Sunset Cliffs Natural Park. Enjoy local shops and eateries at Liberty Station and Point Loma Village.

Top Mission Bay Hotel Reviews

Wyndham San Diego Bayside

Wyndham San Diego Bayside

10/10 Excellent
"100"
NOE 1-night trip
Posted less than an hour ago
Wyndham San Diego Bayside

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.