Find Boutique Hotels in San Rafael, CA

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Check availability on San Rafael Boutique Hotels

Our top choices for San Rafael boutique hotels

Carneros Resort and Spa

Carneros Resort and Spa
5.0 star property
Napa
9.2 out of 10, Wonderful, (355)
"Excellent hotel!"
United States
Yiting
The price is AED 2,201
AED 2,831 total
includes taxes & fees
6 Jan - 7 January 2026
Carneros Resort and Spa

MacArthur Place Hotel & Spa

MacArthur Place Hotel & Spa
4.0 star property
Sonoma
9.4 out of 10, Exceptional, (850)
"Lovely hotel! Great facilities, delicious food."
United States
Sara
The price is AED 2,641
AED 3,271 total
includes taxes & fees
14 Dec - 15 Dec
MacArthur Place Hotel & Spa

Berkeley City Club

Berkeley City Club
2.5 star property
Telegraph District
8.8 out of 10, Excellent, (696)
"Wonderful, beautiful, old world hotel, right in the heart of bustling Berkeley. "
United States
Peter
Berkeley City Club

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf
8.6 out of 10, Excellent, (2322)
"Excellent location."
United States
Rena
The price is AED 491
AED 707 total
includes taxes & fees
25 Dec - 26 Dec
Hotel Zephyr San Francisco

Inn At Union Square

Inn At Union Square
3.5 star property
Union Square
9.2 out of 10, Wonderful, (1004)
"Friendly, cozy, unique and a great value. "
United States
Brooke
The price is AED 380
AED 539 total
includes taxes & fees
16 Dec - 17 Dec
Inn At Union Square

The Marker Union Square San Francisco

The Marker Union Square San Francisco
4.0 star property
Union Square
9.0 out of 10, Wonderful, (1100)
"Beautiful hotel with very friendly staff!! Location is also very central, walkable to a lot of restaurants. "
United States
Akila
The price is AED 513
AED 604 total
includes taxes & fees
2 Jan - 3 January 2026
The Marker Union Square San Francisco

Argonaut Hotel

Argonaut Hotel
4.5 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (1204)
"Great location, excellent staff."
United States
Walter
The price is AED 757
AED 1,046 total
includes taxes & fees
4 Jan - 5 January 2026
Argonaut Hotel

Hotel Emblem San Francisco

Hotel Emblem San Francisco
4.0 star property
Union Square
9.4 out of 10, Exceptional, (1000)
"Nice room, helpful staff and great location. "
United States
Okan
The price is AED 485
AED 718 total
includes taxes & fees
3 Jan - 4 January 2026
Hotel Emblem San Francisco

Taj Campton Place

Taj Campton Place
5.0 star property
Union Square
9.2 out of 10, Wonderful, (1002)
"Wonderful Staff and hospitality."
United States
Rachel
The price is AED 654
AED 896 total
includes taxes & fees
28 Dec - 29 Dec
Taj Campton Place

Palihotel San Francisco

Palihotel San Francisco
3.5 star property
Union Square
8.4 out of 10, Very Good, (624)
"Great vibe here and the rooms and so cute . Excellent bar and bar staff . "
United States
Lana
The price is AED 367
AED 524 total
includes taxes & fees
15 Dec - 16 Dec
Palihotel San Francisco
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top San Rafael Hotel Reviews

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Frequently asked questions

What's there to see and do in San Rafael?
The shopping, festivals, and restaurants are just some of the things to enjoy while you're in the area. Activities and attractions to experience around San Rafael include Pier 39, San Francisco Bay, and Mission San Rafael Arcangel. You might also want to see spots like Oracle Park, Marin County Civic Center, and China Camp State Park during your trip.
What kind of weather should I plan for when I travel to San Rafael?
Getting an idea of what to expect from the weather in San Rafael will help you enjoy your stay to the fullest. The hottest months are usually September and August with an average temp of 63°F, while the coldest months are January and February with an average of 51°F. Average annual precipitation for San Rafael is 21 inches.
What's the best way to get to my boutique hotel in San Rafael?
You have a few options for getting to San Rafael. The closest major airport is Oakland Intl. Airport (OAK), which is located 25 mi (40.3 km) from the heart of the city. If you'd like to explore around the area, consider renting a car to take in more sights.