Search Hostels in Yakushima

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Next weekend
13 Nov - 15 Nov
In two weeks
20 Nov - 22 Nov
In one month
4 Dec - 6 Dec
In two months
1 Jan - 3 Jan
No exact matches found, but these alternatives could be just right

Recommended hotels in Yakushima

A lobby with a large wooden sculpture, stone pillar, and seating area.

1. Yakushima Green Hotel

Yakushima Green Hotel
3.0 star property
Yakushima
8.8 out of 10, Excellent, (189 reviews)
"Great hotel with friendly staff that was knowledgeable about the island and willong to help us navigate the bus routes as well as set-up a hike. Great stay!"
United States
Hadrien
The price is AED 440
AED 484 total
4 Dec - 5 Dec
Yakushima Green Hotel
A modern building with large windows and a stone pathway leading to the entrance.

2. Yakushima Jomon No Yado Manten

Yakushima Jomon No Yado Manten
3.0 star property
Yakushima
8.6 out of 10, Excellent, (113 reviews)
"I can't say enough how helpful and kind the hotel staff was. Our room was in need of updating however everything was very clean."
United States
Eydie
The price is AED 976
AED 1,074 total
30 Nov - 1 Dec
Yakushima Jomon No Yado Manten
A modern infinity pool with clear glass walls, offering a view of the ocean and surrounding landscape.

3. samana hotel Yakushima

samana hotel Yakushima
3.5 star property
Yakushima
9.8 out of 10, Exceptional, (123 reviews)
"Beautiful property. Breakfast and dinner buffets were gourmet and luxurious. Large, airy rooms and beautiful views of the southern part of Yakushima. Onsen facility was very nice as well."
United States
Vinti
The price is AED 1,472
AED 1,619 total
17 Nov - 18 Nov
samana hotel Yakushima
A single-story house with a porch, a front door with glass panels, and a small front yard.

4. Cottage Morinokokage

Cottage Morinokokage
2.5 star property
Yakushima
9.4 out of 10, Exceptional, (88 reviews)
"What a wonderful place to stay on Yakushima Island!"
Australia
Anonymous traveler
The price is AED 394
AED 434 total
23 Nov - 24 Nov
Cottage Morinokokage
An outdoor seating area with wooden tables and chairs, a staircase leading to the entrance, and a view of the interior dining space.

5. Arc yakushima

Arc yakushima
2.0 star property
Yakushima
The price is AED 387
AED 426 total
1 Dec - 2 Dec
Arc yakushima
A traditional Japanese room with tatami mats, a low table with a bowl, and a view of mountains through large windows.

6. Tashiro Bekkan

Tashiro Bekkan
2.5 star property
Yakushima
8.6 out of 10, Excellent, (49 reviews)
"Good old traditional Japanese inn"
Japan
Anonymous traveler
The price is AED 454
AED 500 total
4 Dec - 5 Dec
Tashiro Bekkan
A traditional Japanese interior with tatami flooring, a large tree trunk, and wooden beams.

7. Sen-no-ie

Sen-no-ie
2.5 star property
Yakushima
10.0 out of 10, Exceptional, (17 reviews)
"Very romantic and quiet and well service,"
United States
Khin
The price is AED 390
AED 429 total
8 Nov - 9 Nov
Sen-no-ie
A spacious indoor area with a large window offering a view of a lush green landscape and mountains.

8. Yakushima Iwasaki Hotel

Yakushima Iwasaki Hotel
3.5 star property
Yakushima
8.2 out of 10, Very good, (40 reviews)
"Onsen gift shop staff service overall. Spacious rooms great view!!"
United States
KRISTEN
The price is AED 966
AED 1,063 total
30 Nov - 1 Dec
Yakushima Iwasaki Hotel
A tropical garden with palm trees and a variety of other vegetation.

9. Cottage HANA MANA

Cottage HANA MANA
2.5 star property
Yakushima
10.0 out of 10, Exceptional, (8 reviews)
"Absolutely amazing, comfortable and spotlessly clean place. The host are super accommodating and helpful. Wish we could have stayed longer !"
United States
Benjamin
The price is AED 872
AED 959 total
8 Nov - 9 Nov
Cottage HANA MANA
A room with a laptop on a desk, a plant, and a view of a river and mountains.

10. Hotel Yakushima Sanso

Hotel Yakushima Sanso
3.0 star property
Yakushima
8.2 out of 10, Very good, (14 reviews)
"古いホテルです。フロントは6階でその下に部屋があります。高低差のある建物で、入ったのが1階で戸惑いました。ただスタッフは親切だったのでよかったです。"
Japan
Chisato
The price is AED 711
AED 783 total
5 Dec - 6 Dec
Hotel Yakushima Sanso
A spacious room with large windows, a standing desk, a chair, and a small table.

11. 2R Yakushima

2R Yakushima
3.0 star property
Yakushima
8.0 out of 10, Very good, (5 reviews)
"ホテルが綺麗でとても満足しました 夜も静かで星がとても綺麗でした 近くには温泉や足湯等があり、ゆっくりと過ごす事が出来ました。"
Japan
KAZUMI
The price is AED 531
AED 584 total
12 Nov - 13 Nov
2R Yakushima
A traditional Japanese room with tatami flooring, a television on a wooden stand, and a wooden table in the center.

12. Yakusugi House

Yakusugi House
2.5 star property
Yakushima
9.2 out of 10, Wonderful, (14 reviews)
"Many appliances to use including coin laundry and dryer, spacious rooms and kitchen with plenty of things to cook with. Lovely traditional style Japanese home. "
Australia
Umi
The price is AED 188
AED 207 total
1 Dec - 2 Dec
Yakusugi House
A spacious indoor area with a large window overlooking a pool and the sea. There are several chairs and tables arranged for dining or relaxation.

13. sankara hotel & spa Yakushima

sankara hotel & spa Yakushima
4.0 star property
Yakushima
9.8 out of 10, Exceptional, (112 reviews)
"This is a wonderful hotel. Equivalent to 5 stars. Location, staff, service, food, room, pool, spa - really everything was perfect."
United States
Lena
The price is AED 3,870
AED 4,257 total
30 Nov - 1 Dec
sankara hotel & spa Yakushima
A room with tatami flooring, a wooden table, and blue cushions.

14. Pension Sea Forest

Pension Sea Forest
3.0 star property
Yakushima
7.2 out of 10, Good, (15 reviews)
"Staff was nice, room was clean, food was tasty. Not all the staff spoke English though, so best to have an electronic translator at hand."
Hong Kong SAR China
Anonymous traveler
The price is AED 227
AED 250 total
29 Nov - 30 Nov
Pension Sea Forest
A swimming pool with a curved design, surrounded by palm trees and a beach view.

15. Tanegashima Iwasaki Hotel

Tanegashima Iwasaki Hotel
3.0 star property
Minamitane
8.8 out of 10, Excellent, (24 reviews)
"オーシャンビューできれい。"
Japan
MITSUHARU
The price is AED 352
AED 387 total
1 Dec - 2 Dec
Tanegashima Iwasaki Hotel
A small building with a sign reading 'LAUNDRY AMENITY'. There are potted plants and outdoor seating.

16. park side hotel tanegashima

park side hotel tanegashima
2.5 star property
Nakatane
10.0 out of 10, Exceptional, (1 review)
"Very friendly staff, overall a great experience!"
United States
Thomas
The price is AED 248
AED 276 total
14 Nov - 15 Nov
park side hotel tanegashima
A traditional Japanese room with tatami flooring, a wooden table with a cushion, and a sliding door.

17. Shimayado-HOPE

Shimayado-HOPE
3.0 star property
Minamitane
9.4 out of 10, Exceptional, (3 reviews)
"部屋サイズは大きめで、特にお風呂が一般家庭用のサイズと同程度だったのはよかったです． ただ、周りにお店はないので、少し不便です．"
Japan
Hirokazu
The price is AED 475
AED 529 total
17 Nov - 18 Nov
Shimayado-HOPE
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Learn more about Yakushima

Ancient cedar forests and moss-covered trails await in Yakushima's UNESCO-protected wilderness, home to thousand-year-old Jōmon Sugi trees. Hike to cascading waterfalls in Shiratani Unsuikyo Ravine or spot loggerhead turtles nesting along Nagata Inaka beach between May and August.

See all hotels in Yakushima
A sandy beach with waves, large rocks, and a mountainous backdrop.

Top reviews in Yakushima

A modern infinity pool with clear glass walls, offering a view of the ocean and surrounding landscape.
samana hotel Yakushima

samana hotel Yakushima

samana hotel Yakushima
Yakushima

10/10 Excellent

Beautiful property. Breakfast and dinner buffets were gourmet and luxurious. Large, airy rooms and beautiful views of the southern part of Yakushima. Onsen facility was very nice as well.
United States
Vinti
Reviewed May 7, 2026
samana hotel Yakushima

Frequently Asked Questions

Should I stay in a hostel in Yakushima?

Hostels are a great way to stay for a lower cost, so you can save more for going out.

What is a hostel?

No two hostels look the same, but these dorm-style accommodations all offer shared rooms (though many hostels offer private room options too), low prices, and a social atmosphere.

What are the best hostels in Yakushima?

Ready to book a hostel in town? These top picks get the highest reviews from our travelers and could be a good place to look first: Minshuku Maetakeso - Hostel - Guests can enjoy free WiFi, free parking, and laundry facilities. Rooms come with towels and bed sheets. Sudomari Minshuku Friend - Hostel - Property features include free WiFi, free parking, and laundry facilities. You'll find towels, hair dryers, and bed sheets in all rooms. Tomarigi - Hostel - Property features include free breakfast, free WiFi, and free parking. Rooms come with towels, TVs, and hair dryers. Yukaina Nakamatachi - Hostel - Property features include free WiFi, free parking, and laundry facilities. Rooms come with towels, showers, and free WiFi.

How many hostels are there in Yakushima?

If you're hoping to find somewhere affordable to stay in Yakushima, one of Expedia's 5 hostels could be a great option for you.

When is the best time of year to stay in a hostel in Yakushima?

The weather is important when you're discovering new places, so here are some stats about the seasons: The hottest months are usually August and July with an average temp of 80°F, while the coldest months are January and February with an average of 58°F. The rainiest months in Yakushima are June, September, May, and July, with each month seeing an average of 14 inches of rainfall.

What is there to see and do in Yakushima?

Depending on your interests, you might appreciate these things around Yakushima. Get out into nature with places like Mount Miyanoura, Yakushima National Park, and Yakusugi Land. Cultural attractions include Yakusugi Nature Museum and Yakushima Sea Turtle Hall. Additional attractions include Jomonsugi, Nagata Inakahama, and Isso Beach.

What's the best way to get to and around Yakushima while staying at a hostel?

Keep this information about transit options in and around Yakushima on hand to make the most of your stay: You can search for flights to the nearest airport, which is Yakushima Airport (KUM), 9.8 mi (15.8 km) away from the city center. An alternative is Tanegashima Airport (TNE), which is 34.4 mi (55.4 km) away.

Explore a world of travel with Expedia