A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

Find Cheap Hotels in San Juan Island, WA

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on San Juan Island Cheap Hotels

Tonight
24 Oct - 25 Oct
Tomorrow
25 Oct - 26 Oct
Next weekend
30 Oct - 1 Nov
In two weeks
6 Nov - 8 Nov

Our top choices for San Juan Island cheap hotels

A hotel entrance with a sign reading "The Marina Club," a no smoking sign, and a parking sign.
A room with a bed, a blue armchair with a brown pillow, a round wooden table, and a window with curtains.
A hotel room with a bed, a microwave, a refrigerator, a TV, and a small kitchenette area.
A gym with a treadmill, elliptical, and stationary bike.

1. The Marina Inn

The Marina Inn
Anacortes
United States
Sari
AED 386
AED 435 total
includes taxes & fees
25 Oct - 26 Oct
The Marina Inn
A traditional half-timbered building with a windmill, surrounded by a well-maintained garden with tulips.
A wooden staircase with a plant on the landing.
A kitchen with wooden cabinets, a granite countertop, and a coffee station.
A bedroom with a bed, a nightstand, a green lamp, a red throw blanket, a bathroom with a bathtub, and a door leading to another room.

2. Auld Holland Inn

Auld Holland Inn
Oak Harbor
United States
Jennifer
AED 319
AED 355 total
includes taxes & fees
1 Nov - 2 Nov
Auld Holland Inn
A wooden front door with glass panels, flanked by two large flower pots with pink flowers, and a dark woven mat at the entrance.
A hotel room with two beds, each with white bedding, two bedside lamps, and framed pictures on the wall.
A gazebo with a conical roof, surrounded by a garden with various flowers and a street lamp.
A building with a tower featuring the word "Inn" on its facade, surrounded by greenery and a brick structure.

3. Coachman Inn & Suites

Coachman Inn & Suites
Oak Harbor
United States
Diane
AED 491
AED 546 total
includes taxes & fees
24 Nov - 25 Nov
Coachman Inn & Suites
A marina with boats, a stone bridge, and a well-maintained grassy area.
A golf course with a well-maintained lawn, trees, and a winding road.
A hotel room with a large bed, a desk, two chairs, a nightstand, and a window with curtains.
Property grounds

4. Waterfront King Room with Ocean Views

Waterfront King Room with Ocean Views
Eastsound
United States
Matthew
AED 645
AED 729 total
includes taxes & fees
25 Oct - 26 Oct
Waterfront King Room with Ocean Views
View all properties

Top San Juan Island Hotel Reviews

Explore a world of travel with Expedia