Search Motels in San Juan Island

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Next weekend
In two weeks
In one month
In two months

Our top choices for San Juan Island motels

Anacortes Inn

Anacortes Inn
2.0 star property
Anacortes
8.8 out of 10, Excellent, (438 reviews)
"Clean, convenient for place to stay in Anacortes. Easy access to ferries and restaurants."
United States
Jamie
The price is AED 329
AED 372 total
includes taxes & fees
8 Apr - 9 Apr
Anacortes Inn

Cap Sante Inn

Cap Sante Inn
2.0 star property
Anacortes
8.4 out of 10, Very Good, (161 reviews)
"Just your average older motel but it was clean and they clearly try hard to keep things that way. Everyone was very helpful, we will be back. "
United States
Nichole
The price is AED 316
AED 411 total
includes taxes & fees
17 Apr - 18 Apr
Cap Sante Inn

Coachman Inn & Suites

Coachman Inn & Suites
2.5 star property
Oak Harbor
9.2 out of 10, Wonderful, (1,001 reviews)
"Everything about this motel is nice."
United States
Natalie
The price is AED 496
AED 551 total
includes taxes & fees
20 Apr - 21 Apr
Coachman Inn & Suites

San Juan Motel

San Juan Motel
2.0 star property
Anacortes
7.8 out of 10, Good, (597 reviews)
"Second stay here, same room, great as last time. Nothing fancy, just a simple, clean room easy walking distance from all the shops, restaurants, and bars in downtown Anacortes. "
United States
Denise
The price is AED 250
AED 277 total
includes taxes & fees
5 Apr - 6 Apr
San Juan Motel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Top San Juan Island Hotel Reviews