The Best Hotels Closest to Labuan Bajo Port in Labuan Bajo for 2026

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Our top choices for Labuan Bajo Port hotels

A balcony with wicker chairs and a table, overlooking a turquoise sea with boats and a pier.

An aerial view of a small island with clear turquoise waters, a sandy beach, and a few boats.

A wooden pier with a gazebo, tables, and umbrellas extending into a clear blue sea.

A pool with clear blue water, palm trees, and a distant view of a pier and mountains.

1. AYANA Komodo Waecicu Beach

2.8 km from Labuan Bajo Port

Marvin

AED 612

AED 741 total

includes taxes & fees

30 Oct - 31 Oct

A waterfront resort with a curved building, outdoor seating, and a view of a distant island.

A modern hotel room with a large window offering a view of a body of water and a distant island. There is a seating area with a sofa and armchairs, and a small table with a decorative item.

A wooden deck with seating and a bar area, overlooking a body of water with overwater bungalows in the background.

2. TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

2.2 km from Labuan Bajo Port

Iliana

AED 3,006

AED 3,638 total

includes taxes & fees

1 Nov - 2 Nov

A resort with overwater bungalows connected by walkways, surrounded by clear turquoise water and lush green hills.

A wooden deck with a massage chair and a small table with glasses and a bottle, overlooking a calm sea at sunset.

A sunlit infinity pool with lounge chairs and umbrellas, overlooking a body of water and a distant island.

A spacious lobby with a modern design, featuring a large seating area, wooden accents, and large windows offering a view of the sea.

3. Katamaran Hotel & Resort Komodo

2.4 km from Labuan Bajo Port

Salvatore

AED 492

AED 597 total

includes taxes & fees

27 Oct - 28 Oct

A stone pathway surrounded by lush greenery and various tropical plants.

A restaurant with a staircase leading to a garden, outdoor seating, and a tiled floor.

A hotel room with a bed, a desk, a chair, a window with curtains, and a door.

A corridor with wooden chairs and tables, bamboo partitions, and large windows with views of greenery.

4. Centro Bajo Hotel

1.7 km from Labuan Bajo Port

Carrington

AED 48

AED 58 total

includes taxes & fees

3 Oct - 4 Oct

A coastal landscape with a small island, clear waters, and distant mountains.

A couple seated at a table with a view of boats on a body of water, surrounded by flowers and candles.

A poolside area with lounge chairs and a view of a harbor with boats.

A modern hotel with multiple floors, a waterfront view, and a mountain in the background.

5. Meruorah Komodo Labuan Bajo

0.3 km from Labuan Bajo Port

Rob

AED 364

AED 446 total

includes taxes & fees

1 Nov - 2 Nov

A garden pathway leading to a rustic wooden structure with a thatched roof.

A bathroom with a toilet, sink, and shower.

A white building with wooden doors and windows, a covered porch, and a dirt path leading to a wooden bench.

A spacious room with a high ceiling, large windows, and a table with chairs.

6. Palulu Garden Homestay

0.3 km from Labuan Bajo Port

Carrington

AED 39

AED 49 total

includes taxes & fees

30 Oct - 31 Oct

A coastal landscape with clear turquoise waters, a sandy beach, and boats in the distance.

A sign for a bed and breakfast named "WORLD B&B" with a pathway leading to the building surrounded by tropical plants.

A swimming pool with lounge chairs and umbrellas, surrounded by greenery and a small building.

A wooden deck with a thatched roof, a small outdoor seating area, and a pathway leading to a door.

7. World BnB

2.3 km from Labuan Bajo Port

Anne

AED 74

AED 90 total

includes taxes & fees

2 Nov - 3 Nov

A swimming pool with a lighthouse and boats in the background.

A reception desk with a sign reading "RECEPTION" and a wall with the text "HAOUR KOMODO HOTEL".

A modern hotel room with a large bed, two wooden chairs, a TV, and a painting on the wall.

A room with a wooden door, a small trash bin, a wooden desk with a chair, a sofa, and a window with curtains.

8. Harbour Komodo Hotel

0.3 km from Labuan Bajo Port

Ryan

AED 142

AED 172 total

includes taxes & fees

1 Nov - 2 Nov

A bedroom with a large bed, a desk, and a view of the outdoors.

A modern kitchen with a wooden countertop, a built-in sink, and a flat-screen TV mounted on the wall.

A room with a wooden bench, a refrigerator, a painting on the wall, and a coffee maker.

A bedroom with a large bed, wooden headboard, a nightstand, a dresser, a TV, and a view of the outdoors.

9. Komodo Suites Downtown

0.3 km from Labuan Bajo Port

Eliel

AED 176

AED 213 total

includes taxes & fees

1 Nov - 2 Nov

An outdoor dining area with wooden tables and chairs, overlooking a scenic view of the sea and hills.

A modern hotel room with a large bed, a TV, a sofa, and a view of the city.

A poolside area with wooden deck, seating, and a view of the ocean.

A modern living room with a large window, a sofa, two small tables, and a potted plant.

10. ZASGO HOTEL

0.9 km from Labuan Bajo Port

Jonas

AED 192

AED 233 total

includes taxes & fees

9 Oct - 10 Oct

A balcony with a view of a marina, boats, and a pier.

A modern bathroom with a white sink, mirror, and toilet.

A modern hotel room with a neatly made bed, a bedside table, a chair, and a desk with a mirror and toiletries.

A modern lobby with seating, a reception desk, and a wall-mounted sign.

11. Flamingo Ceria

0.2 km from Labuan Bajo Port

Stephanie

AED 137

AED 165 total

includes taxes & fees

12 Oct - 13 Oct

A two-story building with balconies, large windows, and a flat roof.

A bedroom with a wooden bed, a desk, and a view of a garden.

A multi-level building with a central staircase, outdoor seating area with tables and chairs, and lush greenery.

A hotel room with two beds, a desk, and a view of the outdoors.

12. Hotel Bonne Nuit

1 km from Labuan Bajo Port

Tereza

AED 56

AED 76 total

includes taxes & fees

5 Oct - 6 Oct

A modern hotel with a pool area, lounge chairs, and umbrellas.

A modern interior with a bar area, seating, and a view of a lush garden.

A spacious lobby with a modern design, featuring a large seating area, a dining space, and a view of the outdoors.

A coastal landscape with a clear beach, boats, and mountainous terrain.

13. Crowne Plaza Labuan Bajo by IHG

1.5 km from Labuan Bajo Port

nicole

AED 504

AED 610 total

includes taxes & fees

2 Nov - 3 Nov

A poolside area with lounge chairs and a view of the sea and boats.

A room with a wooden wardrobe, a desk with a chair, a mirror, and a television.

A wooden bench with cushions, a hanging light fixture, and a view of a coastal town.

A modern hotel room with a large bed, a wooden headboard, a seating area with a table and chairs, and a bathroom with a mirror and sink.

14. OhJulia Hotel Komodo

0.2 km from Labuan Bajo Port

Kizzy

AED 243

AED 293 total

includes taxes & fees

1 Nov - 2 Nov

A pool area with multiple water features, surrounded by tropical vegetation and a view of the sea.

A pathway through a lush garden with palm trees and various greenery.

A beachfront hotel with a red-roofed building, palm trees, and a view of the sea.

A modern hotel room with a large bed, a desk, and a view of the ocean.

15. Bintang Flores Hotel

1.8 km from Labuan Bajo Port

Heidi

AED 272

AED 302 total

includes taxes & fees

16 Oct - 17 Oct

A stone archway entrance to a building with a dining area visible inside.

A courtyard with a central fountain, surrounded by tropical plants and a building with a tiled roof.

A dining area with tables covered in white tablecloths, wooden chairs, and a tiled floor.

A person sitting at a desk with a red VAIO laptop and a brochure.

16. Komodo Boutique Hotel

2.8 km from Labuan Bajo Port

Ka Yee Starme

AED 62

AED 76 total

includes taxes & fees

1 Nov - 2 Nov

A circular pool with a tree in the center, surrounded by lush greenery.

A wooden cabin with a pitched roof, a front porch with seating, and a gravel pathway.

A row of bungalow-style cottages with pitched roofs, surrounded by a landscaped garden with pathways and small trees.

A bedroom with a large bed, a TV mounted on the wall, a wooden ceiling, and a view of greenery outside.

17. Tahoma Villas Labuan Bajo by ABM

2.9 km from Labuan Bajo Port

Mayra

AED 192

AED 232 total

includes taxes & fees

16 Oct - 17 Oct

Two wooden cabins with balconies, a swimming pool, and lush greenery.

A covered outdoor area with a concrete pathway, potted plants, and a wooden structure.

A long wooden table with various dishes and drinks, set in an outdoor area with bamboo plants and a view of the sea.

18. Pavilla Labuan Bajo

1.6 km from Labuan Bajo Port

Samuel

AED 54

AED 68 total

includes taxes & fees

1 Nov - 2 Nov

A poolside view with thatched-roof structures and palm trees at sunset.

A hotel with a pool, a pier, and boats on the water.

A spacious indoor dining area with wooden ceiling and large windows, featuring tables and wicker chairs.

An aerial view of a resort with a swimming pool, palm trees, and red-roofed buildings.

19. LAPRIMA Hotel Flores

1.3 km from Labuan Bajo Port

Reny

AED 188

AED 231 total

includes taxes & fees

16 Oct - 17 Oct

A bedroom with a bed, a wooden bench, a wardrobe, and a refrigerator.

A corridor with doors, windows, and chairs.

A white car parked in a driveway with a house in the background.

A corridor with a high ceiling, chairs, and tables, suggesting a dining or lounge area.

20. Ocha Bajo Homestay

1.4 km from Labuan Bajo Port

"This was an excellent place to stay and amazing value for money - the room was spacious, and clean with a comfortable bed and air conditioning and a private bathroom The hostess, Ocha, couldn’t have been more welcoming and helpful and ready to assist with anything you might need. She provided a good breakfast (included in the price) and recommended a local driver who took me to a nearby cave for swimming on my last day then dropped me at the airport."

Ann

AED 116

AED 142 total

includes taxes & fees

1 Nov - 2 Nov

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Compare popular hotels close to Labuan Bajo Port

Property	Property class	Guest rating
AYANA Komodo Waecicu Beach	9.6 Exceptional 128 reviews	View
TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo	10.0 Exceptional 34 reviews	View
Katamaran Hotel & Resort Komodo	9.4 Exceptional 104 reviews	View
Centro Bajo Hotel	9.0 Wonderful 25 reviews	View
Meruorah Komodo Labuan Bajo	9.0 Wonderful 228 reviews	View

Top Labuan Bajo Port Hotel Reviews

Katamaran Hotel & Resort Komodo

10/10 Excellent

"We booked an overwater bungalow for two nights and had an amazing time. Our bungalow was beautiful—we basically checked in and only left for breakfast or to go snorkeling around the resort. There was honestly no reason to leave otherwise. Our only regret is that we didn't stay longer. We celebrated our 20th anniversary while we were there, and the staff decorated our room as a surprise to help us celebrate, which was such a lovely touch. Breakfast was good, and we absolutely loved snorkeling around the hotel "grounds." There are two easy options for getting into the water: one around the pool area and another via a ladder at the end of the dock. Both were extremely easy to access. We brought our own snorkeling gear, but gear was also available to rent if needed. There were plenty of activities offered, but honestly, we were perfectly happy just lying in our overwater hammocks watching the fish below or swimming in our private infinity pool. We ordered room service a few times, and it was always prompt, correct, and hot when it arrived. The staff went above and beyond whenever we asked for anything. This is definitely a "destination resort." Going into town for restaurants or other activities would require arranging a Grab or taxi, but for us, that was completely beside the point. We came here to relax and enjoy the resort, and it was perfect for that. We would absolutely stay here again—and next time, we'd stay longer."

Meruorah Komodo Labuan Bajo

10/10 Excellent

"This hotel was amazing. The location is perfect if you're doing tours, want to go to the nightly fish market, or just want to wander around town. We often had our tour pick us up at the hotel in the morning and simply walked back in the evening because it was so close—and usually faster than driving. We loved sitting out on our balcony in the morning and evening, just watching all the activity in the harbor. I cannot say enough about the breakfast. We checked out over a week ago, stayed at three other hotels, came home to our own kitchen, and we are STILL lusting after it. There was so much to try, and all of it was delicious. And the coffee! They had regular drip coffee, which was what we mostly drank, and it was strong and delightful. You could also order cappuccinos, lattes, etc. if that was what you preferred. There was a fresh juice bar that changed each morning, a congee station, a hot sauce station, a "Western" breakfast station, an Indonesian station, a baked goods station, a gluten-free station, and more. We never ate lunch and usually had a light dinner because breakfast was so plentiful. We also celebrated our 20th anniversary while we were there, and they completely decorated our room for the occasion. It was such a lovely surprise and made us feel incredibly special. For early-morning tours, you can order a breakfast box to take with you, and even that was perfect and scrumptious. Should we ever make it back to Labuan Bajo, we would absolutely stay here aga"

LAPRIMA Hotel Flores

8/10 Good

"Beautiful view from your room; the staff were great"

Harbour Komodo Hotel

10/10 Excellent

"Basic room with everything needed. Clean and up to date. Friendly staff."

ZASGO HOTEL

8/10 Good

"Very convenient to have a store, pharmacy and restaurant all on the same site"

Seaesta Komodo Hotel & Hostel

10/10 Excellent

"Bar was very chilled, great vibes"

Flamingo Avia Labuan Bajo

8/10 Good

"My review would have been a 5 star except the room for my daughter on the first floor was horribly moldy. There were no other rooms so she moved to my room on the second floor. If you can be guaranteed a room on second floor or above, I would stay here. The breakfast area was on the top floor with a beautiful view of the harbor. Staff was very helpful and let us leave our bags there while we went on a tour."

La Colina Komodo Hotel

8/10 Good

"Nice view. The rooms are very simple and comfortable for a short stay but not more. Helpful staff to get your luggage up the hill and stairs."

Crowne Plaza Labuan Bajo by IHG

10/10 Excellent

"Great"

Other attractions near Labuan Bajo Port

Waecicu Beach

8.2/10 (19 reviews)

Why not spend a carefree afternoon at Waecicu Beach during your travels in Labuan Bajo? Wander the gardens or discover the area's sunsets.

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Plaza Marina Labuan Bajo

You can do some window-shopping at Plaza Marina Labuan Bajo during your visit to Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Pede Labuan Beach

8.2/10 (19 reviews)

If a restful vacation is part of your travel plans, Pede Labuan Beach might be the perfect place to seek out during your trip to Labuan Bajo. Wander the gardens or discover the area's sunsets.

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Batu Cermin Cave

8.6/10 (23 reviews)

Explore the great outdoors at Batu Cermin Cave, a lovely green space in Labuan Bajo. Wander the beaches and gardens in the area.

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Sylvia Hill

8.8/10 (3 reviews)

Commune with nature and explore the great outdoors at Sylvia Hill during your travels in Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Frequently asked questions

What's the area like around Labuan Bajo Port?

Labuan Bajo Port is located in an area of Labuan Bajo that travelers like for its island views, beaches, and sunsets. If you're looking for a convenient place to stay, check out the 101 hotels and other accommodations you'll find within a mile.

What's the best place to stay near Labuan Bajo Port?

Adjacent to Labuan Bajo Port, Meruorah Komodo Labuan Bajo is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and a full-service spa. Other good options within a short distance include Harbour Komodo Hotel and ZASGO HOTEL.

How many hotels will I be able to find near Labuan Bajo Port?

Expedia has 101 hotels and other accommodations within a mile from Labuan Bajo Port.

If I need to cancel the hotel reservation for my stay near Labuan Bajo Port, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable if you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and receive a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then you can filter by "fully refundable" to get the best deals available near Labuan Bajo Port.

Where can I learn more about changing or cancelling my trip in the area near Labuan Bajo Port?

For more details about changing or cancelling your stay near Labuan Bajo Port, go to https://www.expedia.com/service/.

What can I see and do near Labuan Bajo Port?

Lounge by the water at Pede Labuan Beach and Waecicu Beach. Explore nature at Batu Cermin Cave and Sylvia Hill. Rangko Cave is also located 7.3 mi (11.7 km) from Labuan Bajo Port, and Cunca Wulang Waterfall is 8.8 mi (14.2 km) away.

Find hotels near Labuan Bajo Port, Labuan Bajo from AED 49

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Treat yourself

Be picky

Check prices for these dates

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Our top choices for Labuan Bajo Port hotels

1. AYANA Komodo Waecicu Beach

2. TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

3. Katamaran Hotel & Resort Komodo

4. Centro Bajo Hotel

5. Meruorah Komodo Labuan Bajo

6. Palulu Garden Homestay

7. World BnB

8. Harbour Komodo Hotel

9. Komodo Suites Downtown

10. ZASGO HOTEL

11. Flamingo Ceria

12. Hotel Bonne Nuit

13. Crowne Plaza Labuan Bajo by IHG

14. OhJulia Hotel Komodo

15. Bintang Flores Hotel

16. Komodo Boutique Hotel

17. Tahoma Villas Labuan Bajo by ABM

18. Pavilla Labuan Bajo

19. LAPRIMA Hotel Flores

20. Ocha Bajo Homestay

Compare popular hotels close to Labuan Bajo Port

Top Labuan Bajo Port Hotel Reviews

Katamaran Hotel & Resort Komodo

Meruorah Komodo Labuan Bajo

LAPRIMA Hotel Flores

Harbour Komodo Hotel

ZASGO HOTEL

Seaesta Komodo Hotel & Hostel

Flamingo Avia Labuan Bajo

La Colina Komodo Hotel

Crowne Plaza Labuan Bajo by IHG

Other attractions near Labuan Bajo Port

Waecicu Beach

Plaza Marina Labuan Bajo

Pede Labuan Beach

Batu Cermin Cave

Sylvia Hill

Frequently asked questions