Find Boutique Hotels in Hakodate

Start date: Check-in selected.
To Date
End date: Check-out

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on Hakodate Boutique Hotels

No exact matches found, but these alternatives could be just right

Recommended hotels in Hakodate

Hot springs
Hakodate Yunokawa Onsen Umi to Akari / Hewitt Resort

Hakodate Yunokawa Onsen Umi to Akari / Hewitt Resort

3.5 star property
Yunokawacho
9.2 out of 10, Wonderful, (347)
"One of the better hotels we have stayed at. The breakfast buffet was huge and the selection of local fish and vegetables was terrific. Room was relatively large by Japan standards and very comfortable. The important question is would we stay there again. ABSOLUTELY! "
United States
Richard
The price is AED 287
AED 323 total
9 Jan - 10 January 2026
Hakodate Yunokawa Onsen Umi to Akari / Hewitt Resort
Public bath
La'gent Stay Hakodate Ekimae

La'gent Stay Hakodate Ekimae

3.5 star property
Hakodate
9.0 out of 10, Wonderful, (1006)
"The room and the staff were great. I really like how convenient this hotel is. "
United States
Ryan
The price is AED 248
AED 280 total
4 Jan - 5 January 2026
La'gent Stay Hakodate Ekimae
Exterior
JR Inn Hakodate

JR Inn Hakodate

3.0 star property
Hakodate
9.4 out of 10, Exceptional, (991)
"Reasonable size room, nice staffs Very good location "
Hong Kong SAR China
Yat Hi
The price is AED 204
AED 226 total
18 Dec - 19 Dec
JR Inn Hakodate
Public bath
La Vista Hakodate Bay

La Vista Hakodate Bay

4.0 star property
Hakodate
8.8 out of 10, Excellent, (1001)
"We like this hotel, good location, convenient to walk around, strong recommend their breakfast 👍"
United States
haiyu
The price is AED 593
AED 744 total
8 Jan - 9 January 2026
La Vista Hakodate Bay
Hot springs
Imagine Hotel & Resort Hakodate

Imagine Hotel & Resort Hakodate

3.5 star property
Yunokawacho
8.6 out of 10, Excellent, (79)
"Property was located a bit far away from the train stations but close to the airport. Staff was pleasant and courteous. The breakfast and dinner buffets were incredible! Plenty of choices and food was super fresh and delicious! Definitely would recommend this place for a relaxing few days. "
United States
James
Imagine Hotel & Resort Hakodate
Property amenity
Toyoko Inn Hokkaido Shinhakodatehokuto-eki Minami

Toyoko Inn Hokkaido Shinhakodatehokuto-eki Minami

3.0 star property
Hokuto
8.6 out of 10, Excellent, (453)
"Great place to stay "
United States
Charles
The price is AED 180
AED 198 total
11 Dec - 12 Dec
Toyoko Inn Hokkaido Shinhakodatehokuto-eki Minami
Exterior
stella site Hakodate

stella site Hakodate

2.0 star property
Hakodate
The price is AED 176
AED 194 total
11 Dec - 12 Dec
stella site Hakodate
Daily buffet breakfast (JPY 2500 per person)
Premier Hotel - Cabin President - Hakodate

Premier Hotel - Cabin President - Hakodate

4.0 star property
Hakodate
8.8 out of 10, Excellent, (1001)
"The room was clean, staff were friendly, and the overall ambience helped me feel calm and relaxed. "
Australia
Cheong Yin
The price is AED 172
AED 210 total
12 Dec - 13 Dec
Premier Hotel - Cabin President - Hakodate
Public bath
Hotel ＆ Spa Century Marina Hakodate

Hotel ＆ Spa Century Marina Hakodate

3.5 star property
Hakodate
9.4 out of 10, Exceptional, (675)
"Great location and service nice rooms and really good breakfast "
United States
Robert
The price is AED 493
AED 552 total
11 Dec - 12 Dec
Hotel ＆ Spa Century Marina Hakodate
Property entrance
Hakodate Onuma Tsuruga Resort EPUY

Hakodate Onuma Tsuruga Resort EPUY

3.5 star property
Nanae
9.6 out of 10, Exceptional, (60)
"Excellent hotel and resort. Very helpful and friendly staff, great location and very quiet environment We had a wonderful time. "
United States
priscilla
The price is AED 794
AED 969 total
11 Dec - 12 Dec
Hakodate Onuma Tsuruga Resort EPUY
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Top Hakodate Hotel Reviews

Explore a world of travel with Expedia

Frequently asked questions

What's there to see and do in Hakodate?
The shopping, seafood restaurants, and sightseeing are just some of the things to enjoy while you're in the area. Activities and attractions to experience around Hakodate include Hakodate City Hall, Hakodate Seikan Renrakusen Memorial Museum Mashumaru, and Sakamoto Ryoma Museum. While you're here, you might also like to explore more of the area and take in additional sights like Morning Market, Ekini Fish Market, and Kanemori Red Brick Warehouse.
What kind of weather should I plan for when I travel to Hakodate?
Having a good idea of the weather in Hakodate is important when you plan your trip. The hottest months are usually August and July with an average temp of 66°F, while the coldest months are February and January with an average of 32°F. Average annual precipitation for Hakodate is 50 inches.
What's the best way to get to my boutique hotel in Hakodate?
You have a few options for traveling to and around Hakodate. The nearest major airport is Hakodate Airport (HKD), which is located 4.5 mi (7.2 km) from the heart of the city. Walk to nearby metro stations like Shiyakusho Mae Station, Hakodateekimae Station, and Matsukazechō Station. If you want to journey outside of the area, hop aboard a train from Hakodate Station, Shinkawa-Chō Station, or Hōrai-Chō Station.