Find Boutique Hotels in San Diego, CA

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Check availability on San Diego Boutique Hotels

Our top choices for San Diego boutique hotels

Exterior
Hercor Hotel - Urban Boutique

Hercor Hotel - Urban Boutique

Hercor Hotel - Urban Boutique
3.0 star property
Chula Vista
8.6 out of 10, Excellent, (1315)
"Great value and location "
United States
Andrew
The price is AED 309
AED 340 total
includes taxes & fees
14 Dec - 15 Dec
Hercor Hotel - Urban Boutique
Lobby
Hotel Republic San Diego, Autograph Collection

Hotel Republic San Diego, Autograph Collection

Hotel Republic San Diego, Autograph Collection
4.0 star property
Downtown San Diego
9.0 out of 10, Wonderful, (1182)
"Amazing stay "
United States
Aaron
The price is AED 469
AED 714 total
includes taxes & fees
28 Dec - 29 Dec
Hotel Republic San Diego, Autograph Collection
Lobby lounge
The Bristol Hotel San Diego

The Bristol Hotel San Diego

The Bristol Hotel San Diego
3.5 star property
Downtown San Diego
8.6 out of 10, Excellent, (1445)
"So clean, Very Nice staff, convenient location ! "
United States
Cindy
The Bristol Hotel San Diego
Interior entrance
Westgate Hotel

Westgate Hotel

Westgate Hotel
4.5 star property
Downtown San Diego
9.0 out of 10, Wonderful, (1004)
"Beautiful hotel, clean and very friendly staff! Beds were comfortable, we enjoyed our stay."
United States
Somer
Westgate Hotel
Presidential Suite, 2 Bedrooms | Living room | 36-inch LCD TV with digital channels, TV, pay movies
Alma San Diego Downtown, a Tribute Portfolio Hotel

Alma San Diego Downtown, a Tribute Portfolio Hotel

Alma San Diego Downtown, a Tribute Portfolio Hotel
4.0 star property
Downtown San Diego
9.0 out of 10, Wonderful, (868)
"Staff was amazing. Room was really nice and the view was PERFECT."
United States
Porscha
The price is AED 423
AED 640 total
includes taxes & fees
17 Dec - 18 Dec
Alma San Diego Downtown, a Tribute Portfolio Hotel
Junior Suite, 2 Queen Beds, Ocean View | Hypo-allergenic bedding, in-room safe, desk, iron/ironing board
Pacific Terrace Hotel

Pacific Terrace Hotel

Pacific Terrace Hotel
4.0 star property
Pacific Beach
9.6 out of 10, Exceptional, (1004)
"Amazing location and staff"
United States
Travis
The price is AED 729
AED 838 total
includes taxes & fees
11 Jan - 12 January 2026
Pacific Terrace Hotel
Exterior
Hotel Indigo San Diego-Gaslamp Quarter by IHG

Hotel Indigo San Diego-Gaslamp Quarter by IHG

Hotel Indigo San Diego-Gaslamp Quarter by IHG
4.0 star property
Downtown San Diego
8.8 out of 10, Excellent, (1004)
"Large, comfy room, good service, good location"
United States
Thanapong
The price is AED 621
AED 856 total
includes taxes & fees
14 Dec - 15 Dec
Hotel Indigo San Diego-Gaslamp Quarter by IHG
Exterior
Tower23 Hotel

Tower23 Hotel

Tower23 Hotel
4.0 star property
Pacific Beach
9.6 out of 10, Exceptional, (1001)
"Great hotel!!"
Canada
RYAN
The price is AED 841
AED 950 total
includes taxes & fees
16 Dec - 17 Dec
Tower23 Hotel
Front of property
The Pearl Hotel

The Pearl Hotel

The Pearl Hotel
4.0 star property
Point Loma
8.6 out of 10, Excellent, (1004)
"Everything was perfect, A much recommended place for people going on a trip to SD. I can’t forget the super comfy bed and pillows, The wife loved them !!"
United States
david
The price is AED 478
AED 539 total
includes taxes & fees
17 Dec - 18 Dec
The Pearl Hotel
Outdoor pool, pool umbrellas
The Lodge at Torrey Pines

The Lodge at Torrey Pines

The Lodge at Torrey Pines
5.0 star property
Torrey Pines
9.2 out of 10, Wonderful, (878)
"Excellent all around!"
United States
Julie
The price is AED 1,407
AED 1,875 total
includes taxes & fees
9 Jan - 10 January 2026
The Lodge at Torrey Pines
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top San Diego Hotel Reviews

Bay Club Hotel & Marina

Bay Club Hotel & Marina

10/10 Excellent
"ROOM WAS FANTASTIC LOCATION WA GREAT STAFF WAS IMPECCABLE "
Stephanie 1-night trip
Posted 20 hours ago
Bay Club Hotel & Marina

Explore a world of travel with Expedia

Frequently asked questions

Looking for a one-of-a-kind accommodation for your visit to San Diego?
If you want to find a smaller hotel with top-notch service, a personal feel, and great ambiance, a boutique hotel may be exactly what you want. Choose from 10 boutique-style accommodations in San Diego to find a property that captures this destination's local spirit.
What's the best boutique accommodation in San Diego?
The Bristol Hotel San Diego is a favorite hotel with Expedia travelers looking for a stylish stay, and features a fitness center and a deli. Pacific Terrace Hotel and Hotel Republic San Diego, Autograph Collection are other boutique-style choices.
How many boutique hotels are there in San Diego?
Expedia has 10 boutique hotels in San Diego.
What's there to see and do in San Diego?
Visitors speak positively about this destination's breathtaking beach views, art galleries, and acclaimed theaters. Top activities and sights around San Diego include San Diego Zoo, Petco Park, and Port of San Diego. While you're here, make sure you don't miss Mission Bay, Mission Beach, and San Ysidro Border Crossing.
What kind of weather should I plan for when I travel to San Diego?
Having a good idea of the weather in San Diego will help you enjoy your stay to the fullest. The hottest months are usually August and September with an average temp of 71°F, while the coldest months are February and January with an average of 57°F. Average annual precipitation for San Diego is 13 inches.
What's the best way to get to my boutique hotel in San Diego?
You have a few options for getting to and around San Diego. The closest major airport is San Diego Intl. Airport (SAN), which is located 2.4 mi (3.9 km) from the heart of the city, but San Diego, CA (MYF-Montgomery Field) may also be an option. You can access metro transit at Civic Center Station, Civic Center Station, and 5th Avenue Station. If you'd like to explore more of the area, ride aboard a train from San Diego Santa Fe Depot, Old Town Transit Center, or San Diego Coaster Sorrento Valley Station.