A lighthouse on a rocky coastline with the ocean in the foreground.

Search Villas in San Juan Islands

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
24 Jul - 26 Jul
In two months
4 Sep - 6 Sep
In three months
2 Oct - 4 Oct
In four months
30 Oct - 1 Nov

Our top choices for San Juan Islands villas

Property grounds

The Orca Inn

The Orca Inn
2.0 star property
Friday Harbor
8.6 out of 10, Excellent, (34 reviews)
"Great no-frills room a short walk from Friday Harbor with friendly and helpful staff. The beds could use a headboard though! A nice budget option on an island that tends to have expensive lodging."
United States
Jane
The price is AED 481
AED 532 total
includes taxes & fees
12 Jul - 13 Jul
The Orca Inn
Exterior

Swinomish Casino & Lodge

Swinomish Casino & Lodge
3.5 star property
Whitmarsh Junction
9.4 out of 10, Exceptional, (1,373 reviews)
"Clean room and helpful staff with a great view"
United States
Rachel
The price is AED 471
AED 528 total
includes taxes & fees
21 Jul - 22 Jul
Swinomish Casino & Lodge
Porch

The Wild Iris Inn

The Wild Iris Inn
4.0 star property
La Conner
9.4 out of 10, Exceptional, (855 reviews)
"Great location and the staff were very welcoming."
United States
Kirsten
The price is AED 536
AED 594 total
includes taxes & fees
27 Jul - 28 Jul
The Wild Iris Inn
Front of property

Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
3.0 star property
Anacortes
9.0 out of 10, Wonderful, (1,037 reviews)
"This place was great. Comfortable beds, great breakfast, convenient to the ferry, and a great view with quiet surroundings. Best of all the price was very reasonable."
United States
Carol
The price is AED 592
AED 656 total
includes taxes & fees
29 Jul - 30 Jul
Anacortes Ship Harbor Inn
Courtyard

Bird Rock Hotel

Bird Rock Hotel
2.0 star property
Friday Harbor
8.8 out of 10, Excellent, (377 reviews)
"Great location, nice and roomy space! Downsides were the adjacent grocery store loading dock was noisy late at night and early in the morning and there is no designated parking."
United States
Larry
The price is AED 606
AED 671 total
includes taxes & fees
22 Jul - 23 Jul
Bird Rock Hotel
Property grounds

La Conner Channel Lodge

La Conner Channel Lodge
2.5 star property
La Conner
9.2 out of 10, Wonderful, (801 reviews)
"Beautiful location and property."
United States
Charlene
The price is AED 752
AED 862 total
includes taxes & fees
14 Jul - 15 Jul
La Conner Channel Lodge
Exterior

The Marina Inn

The Marina Inn
2.5 star property
Anacortes
9.6 out of 10, Exceptional, (1,012 reviews)
"The staff and accommodation is fantastic."
Canada
Farjam
The price is AED 694
AED 777 total
includes taxes & fees
12 Jul - 13 Jul
The Marina Inn
Exterior

The La Conner Inn

The La Conner Inn
3.0 star property
La Conner
9.2 out of 10, Wonderful, (744 reviews)
"Nice hotel, good staff. I would stay there again."
United States
Scott
The price is AED 760
AED 860 total
includes taxes & fees
13 Jul - 14 Jul
The La Conner Inn
Exterior

Trumpeter Inn

Trumpeter Inn
3.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (262 reviews)
"This was our first experience at a bed & breakfast, and it was a great one! We would book again."
United States
Rene
The price is AED 1,076
AED 1,187 total
includes taxes & fees
12 Jul - 13 Jul
Trumpeter Inn
Exterior

Outlook Inn

Outlook Inn
3.0 star property
Eastsound
9.2 out of 10, Wonderful, (518 reviews)
"Beautiful, clean room with great view of the sound and all East Sound restaurants, bars and Crescent each within walking distance."
United States
Brian
The price is AED 1,586
AED 1,806 total
includes taxes & fees
21 Jul - 22 Jul
Outlook Inn
Property grounds

Captain Whidbey

Captain Whidbey
3.0 star property
Coupeville
9.0 out of 10, Wonderful, (354 reviews)
"Gorgeous and peaceful property. The staff were friendly and helpful. We will definitely recommend to our friends, and hope to stay again in the future. "
United States
Shaylin
The price is AED 775
AED 861 total
includes taxes & fees
13 Jul - 14 Jul
Captain Whidbey
Exterior

Discovery Inn

Discovery Inn
2.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (19 reviews)
"Excellent front desk, very helpful."
United States
Thomas
The price is AED 975
AED 1,079 total
includes taxes & fees
10 Aug - 11 Aug
Discovery Inn
Exterior

Semiahmoo Resort Golf & Spa, Trademark Collection by Wyndham

Semiahmoo Resort Golf & Spa, Trademark Collection by Wyndham
3.5 star property
Blaine
8.8 out of 10, Excellent, (1,014 reviews)
"Highly recommend hotel. Beautiful location feels like a 1950s or 1960’s old school America resort in a very good way."
United States
lance
The price is AED 902
AED 1,149 total
includes taxes & fees
21 Jul - 22 Jul
Semiahmoo Resort Golf & Spa, Trademark Collection by Wyndham
Free toiletries, bathrobes, towels, shampoo

Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
3.5 star property
Eastsound
10.0 out of 10, Exceptional, (174 reviews)
"Jill and Charles were the BEST hosts!! The breakfast was fabulous! the property is beautiful and so quiet! Rooms are cozy and comfy!! They were so helpful and were so kind to us as we had to check out early and had our breakfast ready! Great place and we will be back...!!!"
United States
Angela
The price is AED 1,037
AED 1,145 total
includes taxes & fees
15 Jul - 16 Jul
Kangaroo House B&B on Orcas Island
Room, 1 Bedroom, Fireplace, Marina View (Deer Harbor Inn #2) | Balcony

Deer Harbor Inn

Deer Harbor Inn
3.0 star property
Deer Harbor
8.4 out of 10, Very Good, (210 reviews)
"Very quiet and uncrowded. Matthew's BBQ/SMOKE HOUSE restaurant and the music were great 👍"
United States
Theodore
The price is AED 1,053
AED 1,162 total
includes taxes & fees
11 Jul - 12 Jul
Deer Harbor Inn
Executive Suite, 1 King Bed, Ocean View, Oceanfront | Terrace/patio

Rosario Resort

Rosario Resort
2.0 star property
Eastsound
7.4 out of 10, Good, (134 reviews)
"Property was clean with an amazing view. Very comfortable and well maintained"
United States
Blake
The price is AED 736
AED 904 total
includes taxes & fees
14 Jul - 15 Jul
Rosario Resort
Street view

Hotel Leo

Hotel Leo
2.5 star property
Bellingham City Center
9.2 out of 10, Wonderful, (1,011 reviews)
"Great location and place."
Canada
Lisa
The price is AED 476
AED 540 total
includes taxes & fees
21 Jul - 22 Jul
Hotel Leo
Reception

Cap Sante Inn

Cap Sante Inn
2.0 star property
Anacortes
8.2 out of 10, Very Good, (196 reviews)
"Pet friendly and shops nearby and parade route is close"
United States
John
The price is AED 291
AED 384 total
includes taxes & fees
21 Jul - 22 Jul
Cap Sante Inn
Exterior

Anacortes Inn

Anacortes Inn
2.0 star property
Anacortes
8.8 out of 10, Excellent, (538 reviews)
"Great place to stay for whale watching and traveling."
United States
Kathleen
The price is AED 584
AED 655 total
includes taxes & fees
14 Jul - 15 Jul
Anacortes Inn
Exterior detail

The Heron Inn & Day Spa

The Heron Inn & Day Spa
3.5 star property
La Conner
9.2 out of 10, Wonderful, (377 reviews)
"Every time we visit La Conner we stay at The Heron Inn and Day Spa."
United States
Nina Kristen
The price is AED 561
AED 622 total
includes taxes & fees
13 Jul - 14 Jul
The Heron Inn & Day Spa
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top San Juan Islands Hotel Reviews

Rosario Resort

Rosario Resort

10/10 Excellent
"The reviews we read had us worried, but our experience was wonderful. We had a beautiful room right at the water’s edge and enjoyed swimming in the pool. Although the washing machines could use some updating, we were able to wash everything we needed on-site. The staff was kind, but be aware that if you arrive after hours, you will need to find your room on your own. We had no trouble because the maps were clear and the directions made sense. However, other reviewers are correct when they warn you to have your key-entry information saved or printed before arriving. There is no cell service at the property, so you will have to backtrack several miles to access your room information. I would not really describe the property as a resort anymore. Different parts of the property appear to be under separate ownership. The mansion does not seem to be part of Rosario, there are no tennis courts, and the restaurant is also separately owned. Overall, we had a wonderful time at Rosario and would gladly stay there again. Four otters splashed in the water below our room in the early mornings, and seaplanes flew in about once a day. It was quiet at night, peaceful, and incredibly relaxing."
Kirstin 5-night trip
Posted 12 hours ago
Rosario Resort