A densely packed urban skyline with numerous high-rise buildings and a distinctive spherical structure.

Search Aparthotels in Shinjuku Station

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
30 Oct - 1 Nov
In two months
11 Dec - 13 Dec
In three months
8 Jan - 10 Jan
In four months
5 Feb - 7 Feb

Our top choices for Shinjuku Station aparthotels

A modern reception area with a curved reception desk, a glass partition, and a decorative wall with abstract designs.

1. MIMARU Tokyo Shinjuku West

MIMARU Tokyo Shinjuku West
3.0 star property
Shinjuku
9.6 out of 10, Exceptional, (634 reviews)
"Clean room , great location and the staff was very friendly and helpful."
United States
Nakita
The price is AED 1,373
AED 1,527 total
9 Nov - 10 Nov
MIMARU Tokyo Shinjuku West
A modern hotel entrance with a reception desk, a sofa, and a glass door leading inside.

2. Cava House

Cava House
3.5 star property
Shinjuku
9.6 out of 10, Exceptional, (27 reviews)
"It is well located, modern and has good size rooms. Staff is not very well trained, most of them dont have much clue about what exists around hotel etc. Overall good place to stay due to location and nice rooms."
Australia
Richa
The price is AED 1,083
AED 1,191 total
15 Oct - 16 Oct
Cava House
A multi-story hotel with a modern facade, featuring a mix of yellow and blue panels, and a prominent 'Citadines' sign.

3. Citadines Shinjuku Tokyo

Citadines Shinjuku Tokyo
3.5 star property
Shinjuku
9.2 out of 10, Wonderful, (2,927 reviews)
"Everything was great, staff were friendly and helpful."
Canada
Patrick
The price is AED 693
AED 838 total
2 Nov - 3 Nov
Citadines Shinjuku Tokyo
A room with a wardrobe, a bed, a nightstand, and a lamp.

4. Shinjuku16

Shinjuku16
4.0 star property
Shinjuku
9.6 out of 10, Exceptional, (50 reviews)
"Amazing place with laundry and near stations. Place was clean and organized"
United States
Israel
The price is AED 663
AED 729 total
20 Oct - 21 Oct
Shinjuku16
A hotel room with a bed, a ceiling fan, a window with curtains, and a built-in shelf.

5. HANAYADO SHINJUKU

HANAYADO SHINJUKU
2.0 star property
Shinjuku
7.4 out of 10, Good, (3 reviews)
"Spotless room. Everything great "
United Kingdom
Jennifer
The price is AED 337
AED 579 total
19 Oct - 20 Oct
HANAYADO SHINJUKU
A modern hotel room with a large bed, a dining area with a wooden table and chairs, a kitchen area with wooden cabinets, and a large window providing natural light.

6. illi Nuto Shinjuku

illi Nuto Shinjuku
4.0 star property
Shinjuku
9.6 out of 10, Exceptional, (64 reviews)
"Loved this place!"
United States
Eric
The price is AED 1,233
AED 1,356 total
16 Oct - 17 Oct
illi Nuto Shinjuku
A modern hotel room with a bed, bedside table, and a sofa.

7. Stay SAKURA Tokyo Shinjuku Hyaku kura

Stay SAKURA Tokyo Shinjuku Hyaku kura
2.5 star property
Shinjuku
8.8 out of 10, Excellent, (79 reviews)
"We loved our stay of 5 nights. Our family of four was in the one room and it was spacious enough. Two adults and 11yr old across the two singles and 14yr old on the sofa bed. The hotel is located in Koreatown of Japan and was extremely easy to get to Shinjuku and Shibuya. There was an abundance of great restaurants close by. It was extremely clean and had everything we needed."
Japan
Deborah
The price is AED 345
AED 380 total
18 Oct - 19 Oct
Stay SAKURA Tokyo Shinjuku Hyaku kura
A modern hotel room with a bed, a TV mounted on the wall, a dining table with chairs, and a small coffee table.

8. M/W HOTEL

M/W HOTEL
2.0 star property
Shinjuku
9.0 out of 10, Wonderful, (89 reviews)
"Fine place. Very good location for the park."
Denmark
Frederik
The price is AED 550
AED 964 total
15 Oct - 16 Oct
M/W HOTEL
A modern living room with a sofa, a coffee table, and a large window with curtains.

9. illi Enu Yotsuya

illi Enu Yotsuya
3.5 star property
Shinjuku
9.8 out of 10, Exceptional, (53 reviews)
"Beautiful and comfy stay"
Canada
Ethan
The price is AED 767
AED 844 total
16 Oct - 17 Oct
illi Enu Yotsuya
A hotel room with two beds, a window with curtains, a wall-mounted light fixture, and a ceiling vent.

10. Shinjuku Topshot Hotel

Shinjuku Topshot Hotel
2.0 star property
Shinjuku
10.0 out of 10, Exceptional, (1 review)
"Nice and tiny rooms. Very clean and everything available for a night sleeps and nothing more. 7 when store and restaurant within walking distance"
Japan
AMIN ABDULLAH H
The price is AED 699
AED 820 total
19 Oct - 20 Oct
Shinjuku Topshot Hotel
An outdoor seating area with wooden tables and chairs, a large umbrella, and a brick wall in the background.

11. KIZEN VILLA

KIZEN VILLA
4.5 star property
Nakano
9.6 out of 10, Exceptional, (30 reviews)
"Everything about Kizen Villa was magnificent. The hosts were so friendly and interesting. They love meeting people from all over the world and they do everything possible to ensure an enjoyable and pleasant stay. We had more space than we could have ever hoped for staying in Japan. The beds were extremely comfortable and the washer/dryer was very useful as well as the kitchen. I am so happy we stayed here."
United States
Shaunessi
The price is AED 923
AED 1,029 total
13 Nov - 14 Nov
KIZEN VILLA
A rustic kitchen with wooden shelves, a vintage stove, and a blue barrel.

12. Apartment Hotel Shinjuku

Apartment Hotel Shinjuku
2.0 star property
Shinjuku
7.0 out of 10, Good, (47 reviews)
"The guys there were so nice and friendly. The location was better."
Australia
Paul
Apartment Hotel Shinjuku
A modern kitchen with a built-in dishwasher, a stove, and a refrigerator.

13. Tokyo Candle house

Tokyo Candle house
Shinjuku
The price is AED 179
AED 197 total
25 Oct - 26 Oct
Tokyo Candle house
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top Shinjuku Station Hotel Reviews

Hotel Metropolitan Edmont Tokyo

Hotel Metropolitan Edmont Tokyo

10/10 Excellent
"The staff were friendly and efficient. We were very comfortable and had everything we needed. They provided skin care, all shower amenities, pajamas(albeit small)/slippers, and tea/coffee. Hotel was convenient because it was close to multiple train stations, convenient stores and restaurants. I used their delivery service to get my luggages to Kyoto and it was an easy and convenient process. I would definitely book here again and I highly recommend."
Sofia 6-night trip
Posted 2 hours ago
Hotel Metropolitan Edmont Tokyo

Explore a world of travel with Expedia